| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_0907 |
|---|
| Symbol | |
|---|
| ID | 4876649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 982498 |
|---|
| End bp | 985740 |
|---|
| Gene Length | 3243 bp |
|---|
| Protein Length | 1080 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640138219 |
|---|
| Product | DNA helicase/exodeoxyribonuclease V, gamma subunit |
|---|
| Protein accession | YP_001069207 |
|---|
| Protein GI | 126433516 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1330] Exonuclease V gamma subunit |
|---|
| TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00623789 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTCC ATCTGCACCG GGCGGAGCGC ACCGACCTCC TGGCCGACGG ACTCGGTGCC
CTGCTGTCCA CTCCCCTGGC CGACCCGTTC GCCGAGGAGC TCGTGCTCGT CCCGGCGAAG
GGCGTCGAGC GGTGGCTGAG CCAGCGGCTC TCGCACGTCC TCGGCCGCGG TTCCGGCGAC
GACGGGGTCT GCGCGGGCAT CACATTCCGC AATCCGCGGT CCCTAATCGC CGACATTACC
GGCACCCGGG ACGACGACCC CTGGGCCCCC GACTCGCTGG TCTGGCCGCT GCTCGAGGTC
ATCGACGACA ACCTCGACCA ACCGTGGTGC ACCACGCTCG CCACCCACCT CGGCCATTTC
GAACACGGCG AGGAGCAGGA GCTCCGCCAG AGCCGCCGCT ACGCCGTCGC CCGCCGTCTC
GCCGGCCTGT TCGCCTCCTA CGCCCGCCAG CGCCCCGGAC TCCTCGTCGA CTGGCTCGCC
GGCGACCCCG CAGACCTCGA CGACGACCTG CACTGGCAGC CGCATCTCTG GCGACACCTC
GTCGACCGCG TACCCGCCGA CCCACCGCAC ATCCGGCACG CCAAAACCGT TGCCCGCCTT
CATGAGTCAC CCAGCGACCT GCCCGAACGG CTGTCGCTGT TCGGCCACAC CCGGCTGCCC
TCCACCGAGG TCGAACTGCT CGACGCGCTC GCCACCCACC ACGATCTGCA CCTGTGGCTG
CCGCACCCCA GCGACGACCT GTGGACCACC CTCGAACCCC ACCGCGGCGC CGTGCGCCGC
CGCGAGGACA ACACCCACCG CGAGGTCGGC CACCCGCTGC TCGCCACCCT CGGCCGCGAC
CTGCGCGAAC TGCAGCGCAG CCTGCCCGAC GACGCGCAGA CCGACGAGTA TCTGGGCACC
GCCGACCACC CCGACACCCT GCTCGGCTGG CTGCAGTCCG ACATCGCCGC CAACGCGGTC
CGCCCCGACG GCCGCCGACT GCACGACCAC GACCGCTCGG TCCAGGTGCA CAGCTGTCAC
GGCGCCGCCC GCCAGATCGA CGTCCTGCGC GAGGTGCTGC TCGGCCTGCT GGTCGACGAC
CCGACTCTCG AACCCCGCGA CATCCTTGTC ATGTGCCCGG ACATCGAGCA CTACGCACCG
CTGATCGTCG CCGGCTTCGG CCTCGGCGAC GTGATCCACG GTGCGCACCC GGCCCATCGG
TTGCGCGTCA AACTCGCCGA CCGCGCGCTC ACCCAGACCA ACCCGTTGCT GGGCGTCGCC
GCCCAACTCC TCGCGCTCGC CGGCGGCCGC GCCACCGCCA CCGAGGTGCT CAACCTCGCC
GAGGCCCCGT CGATCCGGGC GCGGTTCACC TTCAGCGACG ACGACCTCGA CGCGATCGGC
GACTGGGTAC GCGAGGCCAA CATCCGGTGG GGGTTCGACC GCGAGCACCG CCACCCCTAC
GGCGTCGACT TCGTCCAGAA CACCTGGCGT TTCGGACTCG ACCGGGTGCT CGCCGGCGTC
GCCATGTCCG ACGACTCGCA CGCCTGGCTC GACACCACGC TGCCCCTCGA CGACGTCGGC
AGCGACCGCG TCGAACTCGC CGGCCGCCTC GCCGAATACG TCGACCGACT GCAGCATTGC
GTCGAAAACC TCAGCGGCAC AAGGCCACTC CATGAATGGC TCGATGCGCT GCGCACCGGT
ATCGACCAGC TGACCAGCGT TCCAGACGAC GACACCTGGC AGACCAGCCA ACTGGAGCGC
GAGTTCGCCG ACGTCCTCAC CCAGGCCGGC CCCCGCAAAG ACACCCTGCT GCGCCTGCCC
GACGTCAAGG CCCTGCTCGA CCGCCACCTC GCCGGACGGC CCACCCGGGC CAACTTCCGC
ACCGGCACGT TGACGGTGTG CACGATGGTG CCGATGCGTT CGGTCCCGCA CCGGGTGGTG
TGCCTGGTGG GTCTCGACGA CGGGGCGTTC CCGCGCCTGG GCGTGGTCGA CGGCGACGAC
GCACTGGCCC GCGACCCGAT GACCGGTGAA CGCGACATCC GCTCGGAGGA CCGCCAACTG
CTGCTCGACG CGATCGGCGC GGCGACGGAG AGGCTTGTCG TCACCTACAC CGGCGCCAAC
GAGTACTCCG GGCAGCGCAA ACCCCCGGCG GTGCCGCTGG TCGAATTGCT CGACGCACTC
GACGTCACCA CCGAGGCCCC GGTCCGCGAG CAGATCCTCG TCGAACATCC GTTGCAGCCC
TTCGACGTTC GCAACGTCAC CCCGGGCGCA CTCGGCGTAC CCGGCACACC GTTCACGTTC
GACTCGACGG CGCTGACCGC CGCGACCGTC GCGTCCGGGG ACCGCGCCGA GCGGCCGGGT
CTGCTCACCC ACCCGCTGCC CGCGCCTCCG GAGGACGACG TCGCGCTCGA CGACCTGATC
GGCTTCTTCA AGGATCCGGT CAGGGGGTTC TTCCGGGCGC TGGACTTCAC GCTGCCGTGG
GACGTCGACG CCGTCGAGGA CGCCATGCCG GTGGAGATCG ACGCGCTGGC CGAATGGCAG
GTCGGTGAAC GGATGCTCGA TGACATGCTG CGCGGCCTCA ATCCCGAACA GGCCCAACAG
GCGGAGTGGC GGCGCGGTTC GCTGCCGCCC GGCCGACTCG GCTGGCGCAA GGCGCAGGAG
TTGCGCGATC AGGCCGCCGC GCTGGCCACC GCGGCGCACC GGCACCGACG GCAACCGCCC
CGGGCGTATG ACGTCGACAT CCACCTCGGT GGCGGCCGCC GCGTCACCGG CACGGTCCCG
AAGGTGTACG GCGACCGCAC GGTCACCGTC ACGTACTCCA AACTCGACGG CCGCCACCTG
CTGGCGTCGT GGATCCAGTT GGCGGCGTTG AGCGCTCAAA TGCCCGGTAC GGACTGGGCG
GCGGTGTGCA TCGGCCGCCC GAAGCGGGGC ACCACCCCGC GGGAACGGAT GCTCGGCGCG
CCCGGGGATG CCGCCGGCGT GCTGCAGGAT CTGGTGAACA TGTACGACGC GGGGCGGCGT
GAGCCGATTC CGTTGCCGCC GAAGACGTCC TATGCGTGGG CCGAGGCGCG TCACAGTCGT
GGAGACGCGG AGCGGGAGGC GCGGTACCGC TGGAAGTCGG ACCGCTACCC GGGTGAGGAC
GCCGAACCGG CCAACGTACG GGTGTGGGGG GCGCACGCCC CGCTGGACAC CCTGCTCGCG
GCGGGCATGG ACGGCTACGC CGGACGCCTG TGGCTGCCGA TGCTGGAAGC CGAGAGGGAC
TGA
|
|---|
| Protein sequence | MPFHLHRAER TDLLADGLGA LLSTPLADPF AEELVLVPAK GVERWLSQRL SHVLGRGSGD
DGVCAGITFR NPRSLIADIT GTRDDDPWAP DSLVWPLLEV IDDNLDQPWC TTLATHLGHF
EHGEEQELRQ SRRYAVARRL AGLFASYARQ RPGLLVDWLA GDPADLDDDL HWQPHLWRHL
VDRVPADPPH IRHAKTVARL HESPSDLPER LSLFGHTRLP STEVELLDAL ATHHDLHLWL
PHPSDDLWTT LEPHRGAVRR REDNTHREVG HPLLATLGRD LRELQRSLPD DAQTDEYLGT
ADHPDTLLGW LQSDIAANAV RPDGRRLHDH DRSVQVHSCH GAARQIDVLR EVLLGLLVDD
PTLEPRDILV MCPDIEHYAP LIVAGFGLGD VIHGAHPAHR LRVKLADRAL TQTNPLLGVA
AQLLALAGGR ATATEVLNLA EAPSIRARFT FSDDDLDAIG DWVREANIRW GFDREHRHPY
GVDFVQNTWR FGLDRVLAGV AMSDDSHAWL DTTLPLDDVG SDRVELAGRL AEYVDRLQHC
VENLSGTRPL HEWLDALRTG IDQLTSVPDD DTWQTSQLER EFADVLTQAG PRKDTLLRLP
DVKALLDRHL AGRPTRANFR TGTLTVCTMV PMRSVPHRVV CLVGLDDGAF PRLGVVDGDD
ALARDPMTGE RDIRSEDRQL LLDAIGAATE RLVVTYTGAN EYSGQRKPPA VPLVELLDAL
DVTTEAPVRE QILVEHPLQP FDVRNVTPGA LGVPGTPFTF DSTALTAATV ASGDRAERPG
LLTHPLPAPP EDDVALDDLI GFFKDPVRGF FRALDFTLPW DVDAVEDAMP VEIDALAEWQ
VGERMLDDML RGLNPEQAQQ AEWRRGSLPP GRLGWRKAQE LRDQAAALAT AAHRHRRQPP
RAYDVDIHLG GGRRVTGTVP KVYGDRTVTV TYSKLDGRHL LASWIQLAAL SAQMPGTDWA
AVCIGRPKRG TTPRERMLGA PGDAAGVLQD LVNMYDAGRR EPIPLPPKTS YAWAEARHSR
GDAEREARYR WKSDRYPGED AEPANVRVWG AHAPLDTLLA AGMDGYAGRL WLPMLEAERD
|
|---|
| |