Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_0852 |
Symbol | |
ID | 4876594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 917951 |
End bp | 918697 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640138164 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001069152 |
Protein GI | 126433461 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.424016 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACAG CACCCCTGAC CGGACGGCGG GCACTGGTGA CCGGAGGGTC GCGCGGGATC GGCGCGGAGA TCGTGCGGCG ACTGGCCGCC GACGGTGCCG CGGTGGCGTT CACCTACTCG GCGTCCGGCA CGAACGCGGA GAAACTCGTG GCCGAGGTGG CTGCGGACGG TGGCACGGCG GTGGCCATTC AGGCGGATGC AGCCGATCCG GCGCAGACTG CGGCCGCCGT CGACCGTGCG GTCGCCGAAC TCGGCGGCCT GGACATCGTG GTGAACAACG CCGCCGTCGC GCACATCGCG CCATTCGACG AGTTCCCGGC CGAACAGTTC GACCGTCTGG TGGCCATCAA CATCGGTGGC ATGTACTGGA CCACCCGCAC CGCGATCAAG CACCTGGGTG AGGGTGGGCG GATCATCAAC ATCGGCAGCA TCAACGCCGA CCGCATTCCC GGGCCCGGAC TGTCGGTCTA CGGCATGACC AAGGGGGCGG TGGCCTCGTT CACCCGCGGG CTGGCCCGCG ACCTCGGCGC GAGCGGCATC ACCGTCAACA ACGTGCAGCC CGGGCCGATC GACACCGACG CCAACCCCGA CAGCGGCGAC TTCGCCGAGA GCCTCAAGCA GGTCACCACC CAGGGCCGCT ACGGGCACAC CACCGACGTC GCCTCGTTCG TGAGCTTCCT GGCCGGCCCG CAGTCCGGAT ACATCACGGG CGCGAACCTG AACGTCGACG GCGGATTCAC CGTCTGA
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Protein sequence | MSTAPLTGRR ALVTGGSRGI GAEIVRRLAA DGAAVAFTYS ASGTNAEKLV AEVAADGGTA VAIQADAADP AQTAAAVDRA VAELGGLDIV VNNAAVAHIA PFDEFPAEQF DRLVAINIGG MYWTTRTAIK HLGEGGRIIN IGSINADRIP GPGLSVYGMT KGAVASFTRG LARDLGASGI TVNNVQPGPI DTDANPDSGD FAESLKQVTT QGRYGHTTDV ASFVSFLAGP QSGYITGANL NVDGGFTV
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