Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_0614 |
Symbol | |
ID | 4881492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 670176 |
End bp | 671735 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640137927 |
Product | integrase catalytic subunit |
Protein accession | YP_001068916 |
Protein GI | 126433225 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.579787 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGTTTT CGGAGGACTG TGTCCGGTTT GGGGATCGGC TAGCGCGGTT GGTTGATGCC GGGGTGCCGG TGAAGGAGGC GGCGGTCGCT ACTGGGGTTT CGCGTGACCG GTGTTATGCG ATTCTGCGGG CGATCGGCCG GCCTGTCGGG CAGGCCCGTG GTCGGGGTGA GCGCGCTGAT CAGCGTGGGG TGGCCGACCT GGGTGTGGTC GTGGCCGTAT TCAAGGACAC CGGTTCGATC CTGCAGGCGG CCACAGCGTG TGGGGTGTCG CATTCGACGG CACGCAAACT GTTGGTCGCC GAGGGGCTGG TGACCAGCGG GAAGATCCCG TGGGGCAAGC CCGAGGCGAA ACGTCGGTGC TTGGAGCTGT TCGAGCAGGG TTGGTCCACC GGGGCAGCGG CGCGGGAGGT CGGTGTCAAC GTGCGGACCG CGCGGGACTG GCGCAAGGGG ATCCGGCACA CCAACAACAC GCGGGTTCAC CCCGATGGTC GGGTCGTGGA CTACACCGAC CGGACCGTCT ACAAACAGTC GGTGAGCAAC CTGATCTGCG ATGACACCGG ACGGCCGGCC ATCGATGACC GGTATCTGTC GGTCCAGGAC CGAGTGGCGA TCGCCGATGG CCTCCTCGGG AAGGAGTCGT TACGGACGAT CGCCGGGCGG ATCGGCAAAA ACGTTTCCAC GGTGTCGCGG GAGATTCGTG CGCGCAGCAT TGATGGCCGC TATCTGCCGT ATCACGCCGA TCGGGCGGCT GCCTCGGCCC GGGCTCGGCC CAAGCAGTCC AAACTGGTGG TCAACGTGGT CCTGCGGGGA GCGGTTGAAG AAGGCCTGTC GCGCAAGCTG TCACCGGAGC AGATCTCCAA TCGCCTCCGT CGGGATCATC CCGACGACGA GAGCATGCAG GTGAGCCACG AAACGATCTA CCAAGCCCTC TACTTCCAGG CGCGCGGTGG CCTCAAAAAG GAAGTGCAGC AAGCACTTCG AACCGGGCGC ACCCGACGCA AACCACACCG CAAAGAAGGC GAGCGCTATC AGCGCTTCAC CGACCCGATG GTGATGATCA GCGACCGCCC AGCCGAGGTG GACGACCGTG CGGTTCCCGG GCATTGGGAA GGGGATTTGA TCACCGGGGA GAAGAACCAG ACCGCGATCG GCACTCTGGT CGAGCGATCG ACGCGCTACA CCATGCTGGT GCACCTGCCA GGCGGGCACG ACGCCGAATC GGTACGGGAT GCGCTAATTG CGACTATCAG CACTCTTCCG GCGCATCTGC GTGGCTCACT GACTTGGGAC CAAGGCTGCG AGATGGCAGG GCACAAGCAG TTCACGATGG CCACCGATAT GGCCGTGTAC TTCTGCGATC CGGCCAGTCC CTGGCAGCGC GGCAGCAACG AGAACACCAA CGGCCTGCTG CGCCAGTACT TCCCCAAAGG CACCGACCTG AGCATCTACG GACCCGAGAA CCTCGAACAC GTCGCCCAAG AACTCAACGG CCGCCCACGC AAAACGCTCG GCTGGGATAC CCCAGCCGAG CGCCTGCGTG ATCTACTACT GACCAATTAA
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Protein sequence | MSFSEDCVRF GDRLARLVDA GVPVKEAAVA TGVSRDRCYA ILRAIGRPVG QARGRGERAD QRGVADLGVV VAVFKDTGSI LQAATACGVS HSTARKLLVA EGLVTSGKIP WGKPEAKRRC LELFEQGWST GAAAREVGVN VRTARDWRKG IRHTNNTRVH PDGRVVDYTD RTVYKQSVSN LICDDTGRPA IDDRYLSVQD RVAIADGLLG KESLRTIAGR IGKNVSTVSR EIRARSIDGR YLPYHADRAA ASARARPKQS KLVVNVVLRG AVEEGLSRKL SPEQISNRLR RDHPDDESMQ VSHETIYQAL YFQARGGLKK EVQQALRTGR TRRKPHRKEG ERYQRFTDPM VMISDRPAEV DDRAVPGHWE GDLITGEKNQ TAIGTLVERS TRYTMLVHLP GGHDAESVRD ALIATISTLP AHLRGSLTWD QGCEMAGHKQ FTMATDMAVY FCDPASPWQR GSNENTNGLL RQYFPKGTDL SIYGPENLEH VAQELNGRPR KTLGWDTPAE RLRDLLLTN
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