| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_0270 |
|---|
| Symbol | |
|---|
| ID | 4876016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 304946 |
|---|
| End bp | 306145 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640137584 |
|---|
| Product | virulence factor Mce family protein |
|---|
| Protein accession | YP_001068574 |
|---|
| Protein GI | 126432883 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.691516 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGCC GCCGTTCGAC CCTCGGCGTG GCAGCGGTCG CCGCCTGCGT GACCGTCATC
GCCTCCGGGT GCACCTTCGA CGGGCTCAAC TCGATACCGC TGCCCGGCAC CGTGGGCACC
GGTTCCGGTG CGACGACGTA CCGTGTTCAG CTCGCCAACG TCGGTACGCT GGAATCCAAT
TCGCCGGTGA TGGTGAGCGA CGTGGTGGTC GGCACCGTCG GGAAGATGAC CCTGCGCGGC
TGGCACGCCG ACGTCGAGGT GACGGTGCGG CCCGAGACGG TGATCCCGGC CAACGCCGTC
GCCACCGTGG GCCAGACCAG CCTGCTCGGG TCCATGCACC TGGCGCTCGA TCCGCCGGTG
GGCAAGATGC CGAGCGGTCG TCTGCAGCCG GGAACCACCC TCGGGCTCGA CAGATCGTCG
ACCTATCCGT CGACGGAGCA GACCCTGTCG TCGCTGTCCG TCGTCGTCAA CGGCGGCGGG
CTGGGTCAGG CGGGGGACAT CATCCGGGAG TTCAACGCCA CCCTGAACGG TCGCGAAGAC
AAGTTGCGCG ACCTGTTGGT GCGACTCCGT GACTTCGTCG GAATGCTCGA CACGCAGCGC
GACGACATCA ACGCCTCCCT CGCCGCGCTC AACCGGCTCG GCGGCAGTCT GGCCGGCCAG
CGCGAGGTCA TCACCTCTGC GCTGCAACGC ATCCCACCTG CACTCGACGT CCTGATCGCC
GAACGCCCCC GGCTCACGAC CGCGCTGGAC AAACTGCGGA TCTTCAGCGA TTCGGCCACC
GGCCTCGTCG AGGACACCCA GGCCGACCTC GTGCGCAACC TGAAGAACCT GGAGCCGACA
CTCAAGGCGC TCGCCGACGT CGGTCCGAAC CTCGGCACGG CGCTGGCGTA CGCCCCGACG
TTCCCCTACA CGCAGGGCTT CATCGACCGG GCCATCCGGG GCGACTACAT GAACCAGTTC
ATCATCTTCG ACTTCACGAT CCCGCGGCTC AAGCGCGGCC TGTTCCTCGG CACCCGCTGG
GGGGAGGAGG GCACCCCGAT GGTGCCGGCG CCCGGCGACC CGTGGTACCT CAACTACACG
CTGGATCCGC TCAACGCCCC GGTCGCCCCG CCGACGGCGG TGGCGCCTGT TCCCGAGCTG
ACCGAGACGT CCGACGGGGT CGACACCGTC GATCCGTCCC CGAGCGCCGG GGGTAACTGA
|
|---|
| Protein sequence | MIGRRSTLGV AAVAACVTVI ASGCTFDGLN SIPLPGTVGT GSGATTYRVQ LANVGTLESN
SPVMVSDVVV GTVGKMTLRG WHADVEVTVR PETVIPANAV ATVGQTSLLG SMHLALDPPV
GKMPSGRLQP GTTLGLDRSS TYPSTEQTLS SLSVVVNGGG LGQAGDIIRE FNATLNGRED
KLRDLLVRLR DFVGMLDTQR DDINASLAAL NRLGGSLAGQ REVITSALQR IPPALDVLIA
ERPRLTTALD KLRIFSDSAT GLVEDTQADL VRNLKNLEPT LKALADVGPN LGTALAYAPT
FPYTQGFIDR AIRGDYMNQF IIFDFTIPRL KRGLFLGTRW GEEGTPMVPA PGDPWYLNYT
LDPLNAPVAP PTAVAPVPEL TETSDGVDTV DPSPSAGGN
|
|---|
| |