Gene Mjls_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_0188 
Symbol 
ID4875934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp199997 
End bp201529 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content65% 
IMG OID640137502 
Productamino acid permease-associated region 
Protein accessionYP_001068492 
Protein GI126432801 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.215217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGATC AAGCCGTTAC ACCACAGAAA ACACCAGCTC AAGGCGTGCA ACGACTGAAG 
CGGAACGCCG TGGGGACACT CGGCGTGATC TTCATGGCGG TAGCCACCGC AGCGCCGATC
ACCGCAATGG TCGGCAACGT CCCGATCGCC GTCGGCTTCG GAAACGGTTC GCACGCGCCG
GCGGGTTATC TCGTCGCGAC CATCGTGCTC GGGCTGTTCG CGATCGGCTA CGCGACCATG
GCCAAGCACA TCACCGCCAC CGGCGCCTTC TACGGCTACA TCTCCCACGG GCTGGGCCGC
ATCGTCGGGA TGGCCAGCGG GCTGCTGATC ACGATGGCCT ACATCGTGTT CGAGGCGTCG
CTGATCGGCA TCTTCGCGTT CTTCTTCAAG AACTTCCTGT CGTCGCAGTT CGGCGTCGAC
GTCCACTGGA TCATCCCGGC GCTGCTCATG TTGGCACTCA ACGCGATCCT GACCTACTTC
GACGTCAACC TGACGGCGAA GGTGCTCGGT GTCTTCCTGG TCACCGAGAT CGTCATGCTC
GCCCTCGGTG CACTCGCCGT GCTGTTCCAG GGCGGCGGCC CGGAGGGCTT CGTCGTCGCC
GAGACGCTGA ACCCGATCGG CGCGTTCACC CCGGCCGCGA TCGCCGGCGC CAGCGCGGGC
CTCGGCCTGT TCTTCGCGTT CTGGTCGTGG GTCGGCTTCG AGTCCACCGC CATGTACGGC
GAGGAGTCCA AGGACCCGAA GCGAATCATC CCGCGCGCCA CCATGATCGC GGTTCTGGGC
GTCGGCCTGT TCTACGTGTT CGTGTCGTGG ATGGCGATCG CGGGCACCGG CCCCTCAAAG
GCGCTGGAAC TCGCGCAGGA CGCCGACACG TCGTCGGAGA TCTTCTTCGG CCCGGTGCGC
AGCACCTACG GCGAGTGGGC GATCACGCTG TTCAACATCC TGCTGGTGAC CGGTTCGTTC
GCCTGCGGTA TGGCCTTCCA CAACTGTGCC TCCCGCTACC TGTACGCACT CGGGCGTGAG
GGTCTGTCGA GCGGCCTGCA GAAGACCCTG GGCGCCACCC ACCACAAGCA CGGTTCGCCC
TACATCGCGT CGTTCGTGCA GAGCGGTATC GCGCTGATCC TGGTCCTCGG GTTCTTCGCC
GCGGGCATGG ATCCGTACGT GCACATGTAC ACGCTGCTGG CGATCCTGGG CACCATGGCC
ATCCTGATCG TGCAGTCGCT GTGTGCGTTC GCGGTGATCG CCTACTTCCA CTTCCACAAG
GAACACCCGT CCAGCGCGCA CTGGTTCAAG ACGTTCCTGG CTCCGCTGAT GGGCGGCATC
GGCATGCTCT ACGTCGTCTA CCTGCTGTGG GAACACAAGG AGTCGGCGGC AGGGACCGCG
TCGGGCACCC TGCTGTTCAA GCTGACGCCG TGGATCGTGG TGGCGATCTT CGTCTTCGGG
GCGGCCATGG CCACGTACTT CAAGTACTGT GACGCCCGCC GCTACGACCT GATCGGGCGG
ATCGTCTACG ACGACAGCGA GATTCGGGAC TAA
 
Protein sequence
MADQAVTPQK TPAQGVQRLK RNAVGTLGVI FMAVATAAPI TAMVGNVPIA VGFGNGSHAP 
AGYLVATIVL GLFAIGYATM AKHITATGAF YGYISHGLGR IVGMASGLLI TMAYIVFEAS
LIGIFAFFFK NFLSSQFGVD VHWIIPALLM LALNAILTYF DVNLTAKVLG VFLVTEIVML
ALGALAVLFQ GGGPEGFVVA ETLNPIGAFT PAAIAGASAG LGLFFAFWSW VGFESTAMYG
EESKDPKRII PRATMIAVLG VGLFYVFVSW MAIAGTGPSK ALELAQDADT SSEIFFGPVR
STYGEWAITL FNILLVTGSF ACGMAFHNCA SRYLYALGRE GLSSGLQKTL GATHHKHGSP
YIASFVQSGI ALILVLGFFA AGMDPYVHMY TLLAILGTMA ILIVQSLCAF AVIAYFHFHK
EHPSSAHWFK TFLAPLMGGI GMLYVVYLLW EHKESAAGTA SGTLLFKLTP WIVVAIFVFG
AAMATYFKYC DARRYDLIGR IVYDDSEIRD