| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_0177 |
|---|
| Symbol | |
|---|
| ID | 4875923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 191181 |
|---|
| End bp | 191969 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640137491 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001068481 |
|---|
| Protein GI | 126432790 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.721122 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCTCA CCGGATACAC CGCACTCGTC ACCGGCGCCA GCGGCGGCAT CGGCGAGGAG
TTCGCCACGC GGTTGGCCGC CGACCGGGTC AACCTGATCC TCGTCGCGCG GCGCACCGAA
CGGCTCGAGG AGTTGCGCGG CAGGTTGCTC GAACGCCATC CCGGGATCGA CATCGACGTG
CTGTCGGCCG ATCTGGGGGT GCCGGGCGCG GCCGCCGCGC TCGCCCAGCA GGTCGACGCC
CTCGGCCGCC GGGTGGATGT GCTGATCAAC AACGCCGGCA TCGGTCTGCA CGGCAGCTTC
GCCGAACAGG ACCCGGCGGC CAACGCCGCG CAGATCCAGT TGAACTGCGT CACGCTGGTC
GAGTTGACCG GCTATTTTCT GCCGGCGATG ATCGCCGCGA AACGCGGGGT GGTCCTCAAC
GTCGGGTCGA CCGCCGGTTT CCAGCCCGTG CCCAGCATGG CGGTGTACGG CGCCACCAAG
GCCTTCGTGC TGTCGTTCTC CGAGGCGCTG TGGCAGGAGA CCCGCGGCTC GGGGGTCAAG
GTGCTCACGC TGTGTCCGGG CGCCACCGAG ACCGAGTTCT TCGACCGCAC CGGAAAGAGC
TTCATGACGC GTGGCCGTCA GAGCTCGGCG CAGGTCGTCG ACACCGCGCT CAAGGCACTC
GACCGCCCCT TCCCGACGGT GGTGTCCGGT CTGCACAACC GCATCCTGGC CCTCGGCTAC
CGGATCGCGC CGCGTCCGGT GCTCGCGATG GTCTCCGAAC AGCTGATGAA GGCGTCCGGT
CAGCGTTAG
|
|---|
| Protein sequence | MKLTGYTALV TGASGGIGEE FATRLAADRV NLILVARRTE RLEELRGRLL ERHPGIDIDV
LSADLGVPGA AAALAQQVDA LGRRVDVLIN NAGIGLHGSF AEQDPAANAA QIQLNCVTLV
ELTGYFLPAM IAAKRGVVLN VGSTAGFQPV PSMAVYGATK AFVLSFSEAL WQETRGSGVK
VLTLCPGATE TEFFDRTGKS FMTRGRQSSA QVVDTALKAL DRPFPTVVSG LHNRILALGY
RIAPRPVLAM VSEQLMKASG QR
|
|---|
| |