Gene Mjls_0129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_0129 
Symbol 
ID4875875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp139863 
End bp140876 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content70% 
IMG OID640137443 
ProductRNA polymerase factor sigma-70 
Protein accessionYP_001068433 
Protein GI126432742 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02960] RNA polymerase sigma-70 factor, TIGR02960 family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.606049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCCA TCGTGCGTAA GCTCGCCAGC GTGACCGTCC TGGCTCGTAC CGTCGACGAC 
GGCCCTGACG AAGACGCATT CCTCGCCGAT GCACAGAAGT ATCGACGGGA ACTGCTCGCG
CACTGCTACC GGATGACCGG GTCACTGCAC GACGCCGAAG ACCTGGTGCA GGAGACGTAT
CTGCGGGCGT GGAAGTCCTA CAAGGGTTTC CAGGGCAAGT CGTCGGTGCG CACCTGGCTC
TACCGGATCG CCACGAACAC CTCGCTGACC GCGCTCGACG GCCGGGCTCG CCGGCCGTTG
CCCACCGGCC TCGGTGCGCC CAGTTCCGAC CCGGTCGACG ACATCCACGA ACGCGCCGAG
GTGCCGTGGC TGCAGCCGCT GCCCGACGAC GCCGGCGACC CGTCGAGCAT CGTGGGCTCA
CGGGAGTCGG TGCGGTTGGC GTTCATCGCG GCGCTGCAGC ACCTCTCCCC GCGGCAGCGC
GCGGTGCTGG TGTTGCGCGA GGTGCTGCAG TGGAAGGCGG CCGAGGTCGC CGACGCGCTG
GGCACGTCCA CCGCGGCGGT GAACAGCCTG CTGCAGCGGG CGCGGGCCCA ACTCGACGCC
ATCGGGCCGA GCGAGGACGA CGACCTGCGC CCGCCGGAGT CTCCGGAGGC CAGGGACCTG
CTGACCCGCT ACATCGCGGC GTTCGAGACC TACGATGTCG ACAAGCTGGC CGACCTGTTC
ACCGCGGAGG CCGTGTGGGA GATGCCGCCG TTCGACGGGT GGTACCAGGG CCCGCACGAC
ATCGTGCTGC TGTCGAAGAC GCACTGCCCG GCCGAACGGG CGGGCGATAT GCAGCTGATT
CCGACCACCG CCAACGGGCA GACCGCCGCG GCGCTGTACA TGCGCAATCC GGCGACCGGT
CGGCACGAGG CCTTCCAGCT GCATGTCCTC GACGTCACGG CGGACGGCAT ATCGCACGTG
GTGGCGTTCC ACGCGACGAC GTTCGCGCCG TTCGGGCTGG CGGACACGCT GTAG
 
Protein sequence
MSAIVRKLAS VTVLARTVDD GPDEDAFLAD AQKYRRELLA HCYRMTGSLH DAEDLVQETY 
LRAWKSYKGF QGKSSVRTWL YRIATNTSLT ALDGRARRPL PTGLGAPSSD PVDDIHERAE
VPWLQPLPDD AGDPSSIVGS RESVRLAFIA ALQHLSPRQR AVLVLREVLQ WKAAEVADAL
GTSTAAVNSL LQRARAQLDA IGPSEDDDLR PPESPEARDL LTRYIAAFET YDVDKLADLF
TAEAVWEMPP FDGWYQGPHD IVLLSKTHCP AERAGDMQLI PTTANGQTAA ALYMRNPATG
RHEAFQLHVL DVTADGISHV VAFHATTFAP FGLADTL