Gene Mjls_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_0003 
Symbol 
ID4875749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp3529 
End bp4422 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content68% 
IMG OID640137314 
Product6-phosphogluconate dehydrogenase-like protein 
Protein accessionYP_001068307 
Protein GI126432616 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1023] Predicted 6-phosphogluconate dehydrogenase 
TIGRFAM ID[TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.062918 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTGG GTCTGGTGGG GCTCGGCAAG ATGGGCTTCA ACATGCGGGA ACGCCTTCGC 
GAAGGCGGAC ACGAAGTCGT CGGCTTCGAT CCCCGGCCCG AGGTGACCGA CGTCCCGTCG
CTCGCCGCGC TGGCCGACGC GCTGGCCGCG CCCAGGGTGG TGTGGGTGAT GGTGCCGTCC
GGTCCGGTCA CGCACGACAC GATCGTGTCG CTCGCCGAGG TGCTGGGTGA GGGCGACCTG
GTGATCGACG GCGGCAACTC CCGCTTCACC GAGGACGCTC CGCACGCAGA GCTGTTGAAA
GCCAAGGGAA TCGGCTTCAT CGACGCGGGC GTGTCCGGCG GTGTCTGGGG GCTGGCGGAG
GGGTATGGCC TGATGGTCGG CGGCGACGAC GCCGACATCG AACGGGTCAT GCCGATCTTC
GACACCCTGC GCCCCCCGGG TGACCGGGCG GACGGATTCG TCCACGCGGG ACCCGTCGGT
GCGGGTCATT TCGCCAAGAT GGTGCACAAC GGTGTCGAGT ACGCGTTGAT GACCGCCTAC
GGCGAGGGTT ATGAGTTGTT GGCCGCCGAG GAGTTGATCC GCGATCCGCA GGCGGTGTAC
CAGGCCTGGA CGAACGGCAC GGTGGTCCGG TCATGGCTGC AGCAGCTGCT CGCCAAGGCC
CTCCGGGAGG ATCCCGGCCT GGCCGAGATC TCCGGCTACA CCGAGGATTC CGGCGAAGGC
CGGTGGACGG TCGAGGAGGC GATCCGCCTC CGCGTGCCGG TGCCGTCCAT CGCGGCATCG
CTGTTCGCGC GGTTTGAATC GCGCCAGGAG GACTCCCCCA CCATGAAGGC CGTCTCGGCG
TTGCGGAACC AGTTCGGCGG GCACGCCGTC CAGAGGATCA GCAAGTCGGG GTAG
 
Protein sequence
MQLGLVGLGK MGFNMRERLR EGGHEVVGFD PRPEVTDVPS LAALADALAA PRVVWVMVPS 
GPVTHDTIVS LAEVLGEGDL VIDGGNSRFT EDAPHAELLK AKGIGFIDAG VSGGVWGLAE
GYGLMVGGDD ADIERVMPIF DTLRPPGDRA DGFVHAGPVG AGHFAKMVHN GVEYALMTAY
GEGYELLAAE ELIRDPQAVY QAWTNGTVVR SWLQQLLAKA LREDPGLAEI SGYTEDSGEG
RWTVEEAIRL RVPVPSIAAS LFARFESRQE DSPTMKAVSA LRNQFGGHAV QRISKSG