| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_3108 |
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| Symbol | |
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| ID | 3921997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | + |
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| Start bp | 3381854 |
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| End bp | 3383020 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637898718 |
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| Product | TDP-4-oxo-6-deoxy-D-glucose transaminase |
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| Protein accession | YP_504514 |
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| Protein GI | 88604336 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | [TIGR02379] TDP-4-keto-6-deoxy-D-glucose transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.787533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0191068 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATTC CATTTACCCG CCCTTATCGA ACCGGAAATG AACAAAAATA CATCAATGAT
ATCTTAACGA ATATTCAGAA CGGAGCACCA ATAAGTGGTG ATGGACCTTA CGGAAAAAAG
TGCGAACAGT TAATGGAGGA GAAGTTCGGG GCACGGAAGG TTCTTCTCAC CACCTCATGC
ACGAGTGCTC TTGAGATGGC TACCCGTCTC ATCAATATAC AGCCCGGAGA TGAGGTGATT
ATGCCCTCCT TCACCTTTGT CTCTACCGCA AACCCGGTGG TAATGGCTGG AGGAAGACCT
GTTTTTGTGG ATATCGACCC GGTTACACTC AATATCGATC CGGCAAAGAT AGAAGAGGCA
ATTACTCCAA GGACGAAGGC TATTTATCCG GTTCATTATG CCGGAGTGTC CTGTCCGATG
GATGAGATAA TGGCCATTGC AAAAAAGTAC AATGTATGGG TTGTTGAGGA TGCAGCACAG
GGGGTTGGTG CGAAATACAA GGGTAAGTAT CTCGGAACCA TCGGAGACTT TGGTTGTTAC
AGTTTCCATG AAACCAAAAA TATAACCTGT GGTGAAGGTG GAGCCCTCGT TATTAACCGG
GATGACCCTG ACCTAATCGA GCGGGCGGAG ATAATCCGGG AGAAAGGAAC TGACCGGAGT
AAGTTTCACC GTGGTCAGGT TGATAAGTAT ACCTGGGTGG ATGTTGGGTC CAGTTATGTG
CAGAGTGAAA TTCTGGCTGC GTTTTTATTT GCTCAACTAG AGGCAATGGA TGAAATTAAT
CAGAAAAGGA TGGAGATTTG GTATAAATAT TATACCCAGT TAAAACCGTT TGAGGAGTCG
GGAGTGATCA GGTTACCGGT AATTCCCGAT TACGCCGAAC ATAATGCCCA TATTTTTTAT
GTTTTGTTCC AGGAACAGAG TGTGAGAGAT ACGGTGATGA AACAATTACA GGAAGCGGGG
ATTCATGCAG TATTTCATTA TATCCCATTA CATTCCTCAC CGATGGGACA GACATTTGGT
TGCCAGGATG GTGATTTACC GGTAACAGAA GAGACTAGTG GTCGATTGCT AAGATTGCCA
TTATTTACAG GAATGAGTAA TGATGAGGAA AATTTCATAT TATCTCGTCT GAAACAGGTG
GTTGAGGAAT TAAGACGTAA TAATTAA
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| Protein sequence | MKIPFTRPYR TGNEQKYIND ILTNIQNGAP ISGDGPYGKK CEQLMEEKFG ARKVLLTTSC
TSALEMATRL INIQPGDEVI MPSFTFVSTA NPVVMAGGRP VFVDIDPVTL NIDPAKIEEA
ITPRTKAIYP VHYAGVSCPM DEIMAIAKKY NVWVVEDAAQ GVGAKYKGKY LGTIGDFGCY
SFHETKNITC GEGGALVINR DDPDLIERAE IIREKGTDRS KFHRGQVDKY TWVDVGSSYV
QSEILAAFLF AQLEAMDEIN QKRMEIWYKY YTQLKPFEES GVIRLPVIPD YAEHNAHIFY
VLFQEQSVRD TVMKQLQEAG IHAVFHYIPL HSSPMGQTFG CQDGDLPVTE ETSGRLLRLP
LFTGMSNDEE NFILSRLKQV VEELRRNN
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