Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_2931 |
Symbol | |
ID | 3925098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 3206289 |
End bp | 3206975 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637898545 |
Product | ABC transporter related |
Protein accession | YP_504342 |
Protein GI | 88604164 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000152083 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.599943 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATACAC AGCCGGTGAT CGTCTTTACT GATGTCACCA AGATTTACCC CCTTGATGCA GGAGATGTGG TGGCCCTTGA CCATCTCTCA CTTGAAATTC AACGCGGGGA GTTTATTGCC ATTATGGGCC CTTCAGGGTC AGGAAAATCA ACCCTGCTCA ATATGATCGG GTGTCTTGAC ATTCCAACGT CAGGTGACGT GATCATCGAT GGAAAGAACA TCCGGACCAT GACCGATGAC CAGCTGACGG AGCTTCGCCG TGATGTTCTG GGATTTATCT TCCAGCAGTT CAACCTGATT CTCCTCCTCA ATGCACTTGA AAATGTCCAG TACCCGCTTA TTCTCAAGAC CGGAGAGACC GGATGCACAG ACCGGTGTAA GGAAGTCCTG GCTGCTGTCG GTCTTACGTC TGATCTCTGG CACCACCGGC CCGGGCAACT CTCCGGCGGA CAACAGCAGC GGGTAGCCAT TGCACGTGCC CTTGTCAATG ATCCGGAGAT CATGCTCTGT GATGAGCCGA CCGGGAATCT GGACACGAAG ACGGGGACCG CGATTATGCA GCTTCTCACA AGACTCTGCA GAGAACAGGG AAAGACGATC GTCATGGTCA CGCATGATCC CCGGACGGCA GAGTATGCAG ACCGGATCAT CATGATTGAA GACGGGAGGA TTACGGAGGA CGCATGA
|
Protein sequence | MDTQPVIVFT DVTKIYPLDA GDVVALDHLS LEIQRGEFIA IMGPSGSGKS TLLNMIGCLD IPTSGDVIID GKNIRTMTDD QLTELRRDVL GFIFQQFNLI LLLNALENVQ YPLILKTGET GCTDRCKEVL AAVGLTSDLW HHRPGQLSGG QQQRVAIARA LVNDPEIMLC DEPTGNLDTK TGTAIMQLLT RLCREQGKTI VMVTHDPRTA EYADRIIMIE DGRITEDA
|
| |