| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2929 |
|---|
| Symbol | |
|---|
| ID | 3925096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 3204465 |
|---|
| End bp | 3205130 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637898543 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_504340 |
|---|
| Protein GI | 88604162 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000125546 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.197708 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAATGG AAATCTTAAC CAACCCCCGT GCTTTTTTCA GCACCATTTG TAAATTGGAA
CCATCTCTGA AGATTCCCGC CCTTATCATC CTTGTGATGG CACTAGTCGG ATCGATTACC
GGGTATATGA TGGGAGAACT CTCAGGGAAA CTGTTCTCTG GAATGATGGA AGGGCTTGCA
ACAATCGCTG CAGTCAGTGC TGCAATATCA ACATTCTTTT CATCCTTTAT CATCTGGCTG
GTTGCAGCAG TGATCCTCTT TGGACTGCAG AAGGTCATGC AGGGTACCGG GACATTCAAG
CGGGTCATGG AGATCTGTGG CTATGGAATG GTTCCTCTCG TCTTTGCAAC CATCATCACA
CTTCTCCTGA GCGGATATTA TATCCCTCAG GCAGATATCA GCCCCATCCG GTCAACCAAT
CCGGAAGAGA TCAGCCAGGC AGCAATGTCC ATGATGCTGG ACCCGGCTCT TCATGAATTC
AGCATCATCT CAACCATCGT CACCATCATC TTCCTCATCT GGGTAGCAAA TATCTGGTCA
ATCGGCGTAG AGACCTGCTG TGGGCTTCCG GCAAAAAAAG CCCTCATCGT CGCAGGACTT
CCGATACTCA TCTATGCTGC CTACACCCTC GCAAGCCTCC TGCTCTTCAC CGGGGGACCG
GTATGA
|
|---|
| Protein sequence | MIMEILTNPR AFFSTICKLE PSLKIPALII LVMALVGSIT GYMMGELSGK LFSGMMEGLA
TIAAVSAAIS TFFSSFIIWL VAAVILFGLQ KVMQGTGTFK RVMEICGYGM VPLVFATIIT
LLLSGYYIPQ ADISPIRSTN PEEISQAAMS MMLDPALHEF SIISTIVTII FLIWVANIWS
IGVETCCGLP AKKALIVAGL PILIYAAYTL ASLLLFTGGP V
|
|---|
| |