Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_2882 |
Symbol | |
ID | 3924177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 3163940 |
End bp | 3165583 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637898494 |
Product | DNA ligase I, ATP-dependent (dnl1) |
Protein accession | YP_504293 |
Protein GI | 88604115 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.812327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATTTC TTGAATTTGC AGAATTGTGT TCCAGGCTTG AGAAAATATC AGGAAGACTG GAGACCATCT CCATTCTGGC AGAGACGATA TCATCTCTCT CTGATGATGA TCTTCCTCAT TTCTGCCGCC TTATTCTGGG AAAACCCTTT CCGGAATGGA GTGGGAAAAA GCTCGGTGTC GGTCCGAATC TCCTGTATGA AGCTGTTGCC TATGTTACCG GCAGAAAACG TGAGGAAGTC ATTGACCGTC TGAGCCGGGT CGGGGATGCC GGTGCTGCGG TTGAAGAACT CCTCTCCCAG AAATCACAGA CATCTTTTTT CACCGTTGAA CTGACTCTTG CTGACATTAT GGCTGCCCTT ATCGAGATAT CCGGAATGGA GGGCGGACGA TCCCAGAAAG AAAAGGTCCG GGTTATCCAG CGAATACTCT CCAGTGCCTC ACCTCTTGAG GGGCATTACA TCACTGCAAT TCTCCTCGAA GATTTTCGGA TTGGGGTCGG TGAAGGAAAC CTTCGGGATG CCATCGCTCA GGCCTTCTCA GTCGACCCGA ACCTTGTTGA GTATGCGAAT CAGGTCAGAA ATGACATGGG AGAAGTCGCG GTGCTGGCAC GAAAGGGAGA AGAAGCTCTC CGCTCAGTCC GGCTGGTTCC GTTCCATCCG GTCAGGATGA TGCTTGCACG GCAGGGAACA ATATCAGGTG TCCTAAAAGA AGGAGATCCG GTTGCGGTTG AGTTCAAGTA TGATGGGGCG AGGTTTCAGT TCCACAAGCA GAACAAAACC TGCAGGATGT ACTCCCGCCG GCTTGAAGAG GTCACCAATG CGATGCCTGA TGTTGTTGCA CTCCTTGACG AGGCTCTTCC TGATGACATT ATTGTGGATG GAGAGGTTAT TGCAGTTCAG GGCGGCCACC CAATGCCATT TCAGACCGTT CTCCGGAGGT TTCGAAGAAA GCACAATGTA GCCGAGGCAG CGGATGCTAT CACGATGATC CCAAACCTCT TTGACATCCT CTACTACAAT CAGGAGATGC TTATTGATCT GCCATTTCGC GAGAGACGGA ATATACTGAC ACAGGTTGCA TCCAGGTATG TAACCCCTCA GCTCGTATCG GATGATGAGA CAGAGATAGA GGCATACTAC CACACCGCCC TTGATGCTGG TCATGAGGGA GTCATGCTGA AATTACAGGG GTCACGGTAC ACACCCGGTG TCAGGGGAAA AGACTGGGTG AAGATAAAAC CGGAGGCCGA TACCCTGGAC CTTGTGGTAA CCGGTGCAGA GTGGGGTGAA GGGAAACGTG CTCATGTTTT TGGATCTTTT TTACTTTCAG TCAGAGATGA TGACAGACTG GTTCCTATAA GCCGGGTTGC CACCGGGTTT TCAGACGAAC AACTGATCTG GTTGTTTGAC ACCCTGCAGG ATGATATTAT CAGGAAAGAT GGGAAAATGG TTTATTTTGA ACCCAGGCTG GTCTTTGAGA TCGGGTATTC GGAGATTCAG AAAAGTCCCA ATTACGAGGG AGGGTATGCT CTCCGGTTTC CCCGGTTTAT TGAGGTACGA GAAGATAAAG ACCTGAAAGA AGCAAATACG GCAGAAGATG TCGAGGAGAG ATATATACAG ACACACAGTT CTCTAAATAC ATGA
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Protein sequence | MIFLEFAELC SRLEKISGRL ETISILAETI SSLSDDDLPH FCRLILGKPF PEWSGKKLGV GPNLLYEAVA YVTGRKREEV IDRLSRVGDA GAAVEELLSQ KSQTSFFTVE LTLADIMAAL IEISGMEGGR SQKEKVRVIQ RILSSASPLE GHYITAILLE DFRIGVGEGN LRDAIAQAFS VDPNLVEYAN QVRNDMGEVA VLARKGEEAL RSVRLVPFHP VRMMLARQGT ISGVLKEGDP VAVEFKYDGA RFQFHKQNKT CRMYSRRLEE VTNAMPDVVA LLDEALPDDI IVDGEVIAVQ GGHPMPFQTV LRRFRRKHNV AEAADAITMI PNLFDILYYN QEMLIDLPFR ERRNILTQVA SRYVTPQLVS DDETEIEAYY HTALDAGHEG VMLKLQGSRY TPGVRGKDWV KIKPEADTLD LVVTGAEWGE GKRAHVFGSF LLSVRDDDRL VPISRVATGF SDEQLIWLFD TLQDDIIRKD GKMVYFEPRL VFEIGYSEIQ KSPNYEGGYA LRFPRFIEVR EDKDLKEANT AEDVEERYIQ THSSLNT
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