| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2578 |
|---|
| Symbol | |
|---|
| ID | 3923263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 2855156 |
|---|
| End bp | 2856556 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637898189 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_503994 |
|---|
| Protein GI | 88603816 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG5270] PUA domain (predicted RNA-binding domain) |
|---|
| TIGRFAM ID | [TIGR00451] uncharacterized domain 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGGAT TATACCACGG CAGAATTCTC CTTCACTGGT GTGATTCGTG TCATACGCCG
GTTCTTGCTG AGCATTGTGC ATGCGGGGCA GCTACCAGAG CAGTCCCGGT AACTCCTCCT
GGTGATGCAC GACCCGCATT TCCCGAAGAT ATTGCCTTTG TAAATTCGAT ATATGAAGAA
CAGTTTGGAA TGTCGATCAT TCCGGAAGGC CAGATCGCAC TTATGAATAA AGTTCCGGAT
CATGACCGGA TGGAAGAGAT AATCGTAGGT GGAGCGATAG TAGGGGCTAT CCGATATCTT
CCCGGAGAAC GTCGCTGGGA GGCTCTTCCC CGTCCTGATG CGGCGTTGAT TGCTCAACCA
AAAAAGCGGT TTATGGTTAT TGATGAAGGG GCGCTTTCTT CTATCAGGGA AGGCAGAAGT
CTGCTGGCTC CCGGTCTTAT CTCCTGTGAC TCCTCGATCA GAGAGGGGGA TGAGGTCTTT
ATAATGACCC CGTCTGGTAT CTGTGCCGGT GTTGGCAGGG CACGGGTGGA TGCTGAAGAA
GCAAATCGGA TGGAGCGGGG ACAGGTGGTG AAGACAAGAA AAAATATCCC CTCCGTTTAT
ACACCCGGTG AGGCAACCTG GGATGATGTC GTACAGGCAA ATGCTGACGT GCTCAAAAAA
GTTGAAGCAG CATCTGGAAA ATTCATCGCG GACAGCATCG GCCCGTATGA GCATCTCCCT
ATGTCTGTCT CATATTCGGG TGGGAAAGAC AGTCTTGCAA CATTACTTGT CGTGATGAAC
ACCTATCGCA AGATGCCAAT TCTCTATATC GATACCGGCC TTGAGTTTCC ATCAACCGAA
GAGAATGTCT GCGATGTGCA GGACCGATAT GGGCTTGAGT GCGTTAGGAT CGAATCTATC
AATGAGTTCT GGCGGGACTT TGAAGTCTCC GGTCCTCCGT CCAGGGATAA CCGGTGGTGT
TGCCGAACCT CCAAACTGGA GCCCCTGCGC CAGTACATCG TCAAAACCTA TGGTGAGGAT
GGTGAGATAG TATCTTTCAT TGGTCAACGC AAGTATGAGT CCTTTTCACG GATGAAAAAC
CCCAGGGTCT GGAGGAACTC CTATGTGAAT AATCAGATAT GTCTAGCCCC GATACATACG
TGGACGGCTC TCCATGTATG GCTGTATATC TTCCGGGAGA AGGCTCCTTT TAATGAGATG
TACCGGCATG GGGTTGACCG GATGGGGTGT TATATGTGCC CTGCCAGCGA CCTTGGAGTA
CTGGAGAAGA TTCAGGCTAC TCATCCCGAA CTCTGGGAGG AATGGGAGCA GGCAGTATCA
TTGTGGATGA ATAGGAAGGG TATATCACAA TCCTGGTTTG AGAGTGGGCA ATGGAGAACT
CAGGGAGATA AGGCAATATG A
|
|---|
| Protein sequence | MGGLYHGRIL LHWCDSCHTP VLAEHCACGA ATRAVPVTPP GDARPAFPED IAFVNSIYEE
QFGMSIIPEG QIALMNKVPD HDRMEEIIVG GAIVGAIRYL PGERRWEALP RPDAALIAQP
KKRFMVIDEG ALSSIREGRS LLAPGLISCD SSIREGDEVF IMTPSGICAG VGRARVDAEE
ANRMERGQVV KTRKNIPSVY TPGEATWDDV VQANADVLKK VEAASGKFIA DSIGPYEHLP
MSVSYSGGKD SLATLLVVMN TYRKMPILYI DTGLEFPSTE ENVCDVQDRY GLECVRIESI
NEFWRDFEVS GPPSRDNRWC CRTSKLEPLR QYIVKTYGED GEIVSFIGQR KYESFSRMKN
PRVWRNSYVN NQICLAPIHT WTALHVWLYI FREKAPFNEM YRHGVDRMGC YMCPASDLGV
LEKIQATHPE LWEEWEQAVS LWMNRKGISQ SWFESGQWRT QGDKAI
|
|---|
| |