| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2498 |
|---|
| Symbol | |
|---|
| ID | 3924766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 2775340 |
|---|
| End bp | 2776737 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637898110 |
|---|
| Product | PKD |
|---|
| Protein accession | YP_503917 |
|---|
| Protein GI | 88603739 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3291] FOG: PKD repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000170724 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA AATTCCTTAC AAGCATTCTG ACCATATGTA TGGTTTCATT GTTCCTTTGT
GGAACAGTAT GTGCTGATAA GGTATCCCTT GAGGATATCG GAATCAGTAC CGTCGGACAA
AAAGTTGAAC TTCCCGTTCT TCTGGATTCA GCTCCTGGAG GAATTGCCGG TTATAAATTT
ACCACGTCAT TTGCTCCAGC CGGGATTGCA CAGGTATCTT CAGTAACCAT GCCTGAATGG
GCTGGAATTA AAGTTGTAGA AGGAGCACCT GGTGAAAAGG TGTTAGTATC TGCATTGGAT
CTTGAGATGA AGGTTGAGGC TGGGACAGGG CAGGTACAAA TCTGTACACT TGGCATTGAA
GGATTGTCTG AGGGTGTCGC AACCCTTACA CTCAATATCA CCGAAATCAC CGATGATAAT
GGGAACCCCA TTTCTGTAGA ACTTACTCCT GCAACCATCA CAGTCGGGAG CCAGACCGCA
GCACCAGTCC CGGTCCAGAC GCCCCAGTCC TCCTCTACCC AGGTACCTAC CCCTGAAGTA
ACTCCGGAAA TTCAGGAAAA CACTCCGGTA GTTGAAGTAA CACCAACCGT GACCCCCACA
CCGGTTCCGA CGGTCGTTGC AGATTTCACT GCCCAGCTTC AGGAGGGATC TGCTCCCATG
ACCGTTTTCT TTACCGATAA CTCCACTGGA TACCCAACGA AATTCATGTG GAACTTTGGT
GATGGTTCGA GTGACAACAC ATCTCCTCTT CAGAATCCCC AGCATATTTA TCGGATTCCC
GGAGTGTACA CGGTATCTCT GACGGCATCG AACAGTGAAT ATACCAATAC CACAGAAAAA
GCCGGTTTTA TCACGGTAAA GCCGATGCAC CTTCCTGTTC GGGGAGCAAA AAACAATGTT
ACGATTTTTT CTGTACCTGA CGGAGCAGAA GTATACCTGA ACAATGCGTA TCAGGGTGTA
ACTCCTGCAT TTCTCACCAA TCTTACGTCC AGGGATTATC AACTCCGGCT TCATAAGGAG
GGCTATTACG ATGTTGTCTC TCCGATATCG ATCCTTGATG ATGTCCTTCC AACCTTCATC
TCCGGGTTTG TGATGATGCC ACACCTCGCC GAGATTGGAG AATTATCTGC AAATCCGCCA
CAGACCGGTG CAGCATACAT CGTTTCATAT CCGGAGCTGG TGAATGTCAC AATTGATGAT
ACCCCGGTTG GAAAGACGGA TATCATGGTT ATGAACCTCG CTGTCGGAAT GCATAACCTG
ACCTTACAAA AGGAAGGGTA TGAACCATGG AATGACACCC TTGAGATCAA GAATGGCCTT
GCAGTGATTC AGACCTATCA TTATGAAGAG CCATACTTCT CTCTGAACAG GACGGTTGAA
TATGTTCAGT ATCCCTGA
|
|---|
| Protein sequence | MKNKFLTSIL TICMVSLFLC GTVCADKVSL EDIGISTVGQ KVELPVLLDS APGGIAGYKF
TTSFAPAGIA QVSSVTMPEW AGIKVVEGAP GEKVLVSALD LEMKVEAGTG QVQICTLGIE
GLSEGVATLT LNITEITDDN GNPISVELTP ATITVGSQTA APVPVQTPQS SSTQVPTPEV
TPEIQENTPV VEVTPTVTPT PVPTVVADFT AQLQEGSAPM TVFFTDNSTG YPTKFMWNFG
DGSSDNTSPL QNPQHIYRIP GVYTVSLTAS NSEYTNTTEK AGFITVKPMH LPVRGAKNNV
TIFSVPDGAE VYLNNAYQGV TPAFLTNLTS RDYQLRLHKE GYYDVVSPIS ILDDVLPTFI
SGFVMMPHLA EIGELSANPP QTGAAYIVSY PELVNVTIDD TPVGKTDIMV MNLAVGMHNL
TLQKEGYEPW NDTLEIKNGL AVIQTYHYEE PYFSLNRTVE YVQYP
|
|---|
| |