| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2412 |
|---|
| Symbol | |
|---|
| ID | 3922399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 2659127 |
|---|
| End bp | 2660551 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637898022 |
|---|
| Product | DNA polymerase II small subunit |
|---|
| Protein accession | YP_503833 |
|---|
| Protein GI | 88603655 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1311] Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGACA GCTCCGTTAT CGTGGAACGG TTTCTGGATA CAAAACTTCA GGTCCATCCT
GATGTGGTCA GATATATCTG TGAAAAGAAG GATGAGCGGC TGATTGACCA GATTATATCC
GGCGTTCCTG ATGACTGCCT GGTTGTCTCC TTAAAGCATA TTCCCGGCAT TATCCCGGCC
CGTGACGGGA TCCGGTTCCT CTCTGATGCA GAGATGGATA TCATCTCCGG ACGGATGGGG
TCCGCACGGC CGGTAGCAAA AGTTGAAGAT TATATCGCAT ATTTTGCTGA CCGGTACAGC
CGGCTCTCCG GTATGATCCG GGGGCGGTGC AACCCGGTTC CGATTGAAGC CCTCAAACGC
AACACCCGGT ATAAGCAGGA GGAGTTTTCG GTCTGCGGGA TGGTCATGGA TGTCAGGAGC
ACCGGAAACG GGCACCGGAT GGTGGAACTG GAGGACCCGA CCGGTTCGGT GAATGTGTTA
TTTCATAAGG ACCGTCCAGA CTTTGCAGAA GCGGAACGGA TCATCCCTGA TGAGGTCATC
GGGGTCAGGG GGTCCCTCTC AAATGAGGGA AATCTCATCT TTGCAGATCA GATCTTCAGA
CCTGACATCC CGTTCTCTCA TGCTCCCTAT ACCAGTGACC GAAAAGGTGC GGCAGTTCTC
ATTTCTGACA TCCATGTGGG GAGCGATACA TTCCTAGAGG ATGCATGGAA CCGGTTTGCA
GACTGGCTCA GTGACAGTGA AGTCTCCTAC CTGTTGGTCG CAGGAGATCT TGTAGATGGT
ATTGGTATAT ACCCTGACCA GGACAAGGAG CTGGTTATCA CCAATATTTA TGAGCAGTAC
GATGTTCTGG GAGAGATGTT AACCGATCTG CCCTCCCACA TCAGGATTAT TCTCTCTCCT
GGGAACCATG ATGTGGTCAG GGGTGCAGAG CCTCAGCCGG CCATCCCTGA AAAGTTCAGA
AGTGCATACC CGTCTTCATG TACCTTTGTT GAAAATCCGG CTCTGGTGAA CCTGCAGGGA
GTTCGGTTTC TCATGTACCA TGGCCGGTCA TTTGATGATC TCATCGGCCT GATGCCGGGG
GCAAGTTATG AAAAGGCACA TGAGATCATC CCAGAGATGC TGAAGAGAAG GCATCTTGCC
CCCTGTTATG GGCGACGGAC CCCGATTGCC GCAGATACCG TTGACCGGCT CATCATCGAT
CCCATCCCTG AAGTGGTACA TACCGGTCAT GTCCATATCT ATGGGATCAG CAGGTACCGG
AATGTCCTTG GAATAAACTC AGGGACCTGG CAGAGTCAGA CCGCATTCCA GAAGCAGATG
AACATCCAGC CGACACCTGC AGTCGCAATC GCACTGGACC TGAAGACATT ACAACCGCGA
CTGTTCGATT TTATGAATGG CTCTCCTGAA CCACTCGTTT TATAA
|
|---|
| Protein sequence | MLDSSVIVER FLDTKLQVHP DVVRYICEKK DERLIDQIIS GVPDDCLVVS LKHIPGIIPA
RDGIRFLSDA EMDIISGRMG SARPVAKVED YIAYFADRYS RLSGMIRGRC NPVPIEALKR
NTRYKQEEFS VCGMVMDVRS TGNGHRMVEL EDPTGSVNVL FHKDRPDFAE AERIIPDEVI
GVRGSLSNEG NLIFADQIFR PDIPFSHAPY TSDRKGAAVL ISDIHVGSDT FLEDAWNRFA
DWLSDSEVSY LLVAGDLVDG IGIYPDQDKE LVITNIYEQY DVLGEMLTDL PSHIRIILSP
GNHDVVRGAE PQPAIPEKFR SAYPSSCTFV ENPALVNLQG VRFLMYHGRS FDDLIGLMPG
ASYEKAHEII PEMLKRRHLA PCYGRRTPIA ADTVDRLIID PIPEVVHTGH VHIYGISRYR
NVLGINSGTW QSQTAFQKQM NIQPTPAVAI ALDLKTLQPR LFDFMNGSPE PLVL
|
|---|
| |