| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2315 |
|---|
| Symbol | |
|---|
| ID | 3922057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 2573012 |
|---|
| End bp | 2574211 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637897925 |
|---|
| Product | ribulose-bisphosphate carboxylase |
|---|
| Protein accession | YP_503739 |
|---|
| Protein GI | 88603561 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACG TTATTGCAAC ATATTATTTC AGACCACGAG AAGGAGTCAC TCCTGAATGG
GCTGCACAGG CTATCGCAGA AGAACAGACG ACCGGAACCT GGACCGACAT CTCCACACGG
CAAAACTATG TCCACTACCT GGATGGCGTT GTGGACGAAA TTCATCCCAG TGGTGGCGGG
TACACCTGCA CAATTCGGTA CCCGTCAGAG ATATTTGAAC CTGGAAATAT CCCCCAGTAC
CTCTCGGTTC TTGCAGGCAA CCTTTTTGGT CTCTCCCGGA TAGCAGCAGT GCGACTGGTG
GATGTGGAGT TTTCGCGTGA CATTGTCCCC TTTAAAGGAC CGAAATTCGG GATAGAAGGG
GTCAGAAAAC TGGCAGGCAC TGTTGACCGG CCTCACGTGG GAACAATCAT AAAACCTAAG
GTTGGTCTGA ACCCGAAAGA TACGGCCGCA GTCGCATATG AGGCTGCGAT TGGTGGCGTG
GATCTGATCA AGGATGATGA AACCCTCACC GATCAGGCAT TCTGTCCTCT TGGAGAACGG
CTTCCTCTCA TTATGGAACA ACTTGACCGG GTGAAGAGTG AGACTGGACG GAATGTTCTC
TATGCAGTAA ACATCTCTTC TGCAGGTGAC AAAATCGTCC AGCGGGCACG AGAAGCGGCG
AGGATGGGTG CAAACATGCT CATGATTGAT GTCATCGTGT GTGGTTTCGA TGCAGTCAGG
GCAGTCGCAG AAGAGCCTGG AATCAATCTG CCCATACATG TTCACCGGAC CATGCATGCG
GCAATTACAA GAAATCCGGA ACACGGGATT GCTATGCGCC CCATATGCCG GCTTGTGCGG
ATGCTTGGCG GGGACCAGCT CCATACCGGG ACAGTTTCAG GAAAGATGGA GCACGATGTC
ACGGAGTTGC GCGGTGATAA CCTGGCCCTG ACTGAACCAT TCTTTGATCT GAAACCGACA
TTCCCCGTTG CTTCAGGCGG ACTCCATCCG GGAGGGGTCC ATAAAGAGGT CAGCATGCTC
GGACGGGACA TCATTCTCCA GGCAGGCGGA GGAATTCACG GCCATCCGGA CGGGACACGG
GTAGGTGCAA CAGCAATGAG ACAGGCAGTT GACGCCGCCG TTGCCGGGAT TTCACCAGCG
ACATATGCAG AGGACCATCC CGAGCTGAAA CGGGCACTGG ATAAATGGGG AATTGCATAA
|
|---|
| Protein sequence | MTDVIATYYF RPREGVTPEW AAQAIAEEQT TGTWTDISTR QNYVHYLDGV VDEIHPSGGG
YTCTIRYPSE IFEPGNIPQY LSVLAGNLFG LSRIAAVRLV DVEFSRDIVP FKGPKFGIEG
VRKLAGTVDR PHVGTIIKPK VGLNPKDTAA VAYEAAIGGV DLIKDDETLT DQAFCPLGER
LPLIMEQLDR VKSETGRNVL YAVNISSAGD KIVQRAREAA RMGANMLMID VIVCGFDAVR
AVAEEPGINL PIHVHRTMHA AITRNPEHGI AMRPICRLVR MLGGDQLHTG TVSGKMEHDV
TELRGDNLAL TEPFFDLKPT FPVASGGLHP GGVHKEVSML GRDIILQAGG GIHGHPDGTR
VGATAMRQAV DAAVAGISPA TYAEDHPELK RALDKWGIA
|
|---|
| |