| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2058 |
|---|
| Symbol | |
|---|
| ID | 3923708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 2323460 |
|---|
| End bp | 2325163 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637897665 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_503485 |
|---|
| Protein GI | 88603307 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.681271 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCGT CATATATTCG GCGATTTTTT TATATTTTCA GCGAAATTGG CTTTTTCATA
ATTGTTTGCT CGTTTCACGG AGAGGGATTT TCTATCATCA GGATCAATAG AGATACGATG
AGGTTCTTCA ATACCGCCGG ACCGGTGAAC TGCCAGGATC ATTACTGTCT GCCTCCTCTT
ACCCGGTTTG ATCTCCCTGA AATTCTCACC CTCCTAAGCC AGAAGAAGTA TTTTGTTCTC
CATGCTCCAC GGCAGAGCGG GAAGACCTCA TGTCTGCTTG CCTTGCGGGA GTATCTCAAT
AATTCAGGTG AGTATCGTTC ATTATATATC AATGTTGAAA CGGCTCAGGC TGCTCGGGAT
GATGTAGAAA ACGGGGTCCG TTCAATTATT GTTGAAATTA ATAAAAGAAT GGATCAAAGC
CCGGTTTTTA CAGGATTGGG TGTGGTTACT GCAGATTTAT GGGATAATAC CAATGCCTAC
TCAGTTCTTA ATATTGTCCT GAGCAGACTT GCGTCAATTG ACAATAAACC TCTGGTACTC
CTCATTGATG AGATCGATGC TCTTGTAGGT GATACATTAA TTTCAGTGCT CAGACAGATT
CGGTCAGGAT ATGATAGTCG GCCGGTTCAT TTCCCTTCCT CAATCATCCT CTGTGGAGTC
CGTGATGTCC GTGACTACCG GATTCATTCG GATAAAGACA AGGCGATTAT CACCGGTGGA
AGTGCATTTA ACATCAAGGC TGAATCCTTA CGGCTCGGAA ATTTTACCGA AGAAGAGACT
GGGATCCTTC TCCTTGAACA CACGAAAGAG ACAGGACAGG TTTTTGAAGA AGGAGCTCTT
GCCGCTGTCT GGAATCTGAC ACGTGGCCAG CCCTGGCTTG TCAATGCCCT TGCATATGAG
GTCTGTTTCA AAATAGAAGA GGGAAGGAAC CGTTCCAATC CGATATCAGA GTCTCTTGTC
ATAAAGGCAA AAGAGCGGCT TATCCAAAGA AGGGAGACGC ATCTTGACCA GCTGGTGGAT
AAACTTCAGG AAGAGCGAGT CAGGAGAGTT ATCGAACCAA TACTCACCGG AGAGATGTTT
GAAAAGAACT TCAGACCGGA CGATATCTCG TATCTCGTCG ATCTTGGTCT CATTATCCAG
GAACAAGGTG GAGCTCTTGC GATTGCAAAT CCGATATACC AGGAGATTAT TCCCCGAGAA
CTCAGTTATA CTGCACAGTC AGGTATGGCC CTGAAATCTG TCTGGTATAT CGGTGAAGAC
GGAAGAATCC GGGTGAATGA TCTCCTTCTA TCATTCCAAC AATTCTTTCG TGAACACTCC
GAAAGCTGGA CCGATATCGC CCAGTATAAA GAGGCAGCTC CCCAGCTCCT CCTCCAGGCA
TTTTTACAGC GGATAATCAA CGGAGGCGGA CAGATAATAC GGGAATATGG TCTCGGACGG
GGAAGAACCG ATCTCTTTAT CCTCTGGCAC CTTCCTGACG GAACGTATCA GCGGTTTGTG
ATAGAATGCA AGATGGTGCA CGGCTCACGG GAGGTGACCA TCAGTAAAGG GCTTGTTCAG
GTGACAAAAT ATGCTGATCG GTGCGGGGCA GAAGAGGTGT ATCTGCTTAT CTTTGACCGG
GATAAAAACA AGAGTTGGGA TGAGAAGATC TTTACAGAAA CAATTGAGCA TCAGGGGAGA
ATGGTAGCAG TATTTGGGAT GTGA
|
|---|
| Protein sequence | MKSSYIRRFF YIFSEIGFFI IVCSFHGEGF SIIRINRDTM RFFNTAGPVN CQDHYCLPPL
TRFDLPEILT LLSQKKYFVL HAPRQSGKTS CLLALREYLN NSGEYRSLYI NVETAQAARD
DVENGVRSII VEINKRMDQS PVFTGLGVVT ADLWDNTNAY SVLNIVLSRL ASIDNKPLVL
LIDEIDALVG DTLISVLRQI RSGYDSRPVH FPSSIILCGV RDVRDYRIHS DKDKAIITGG
SAFNIKAESL RLGNFTEEET GILLLEHTKE TGQVFEEGAL AAVWNLTRGQ PWLVNALAYE
VCFKIEEGRN RSNPISESLV IKAKERLIQR RETHLDQLVD KLQEERVRRV IEPILTGEMF
EKNFRPDDIS YLVDLGLIIQ EQGGALAIAN PIYQEIIPRE LSYTAQSGMA LKSVWYIGED
GRIRVNDLLL SFQQFFREHS ESWTDIAQYK EAAPQLLLQA FLQRIINGGG QIIREYGLGR
GRTDLFILWH LPDGTYQRFV IECKMVHGSR EVTISKGLVQ VTKYADRCGA EEVYLLIFDR
DKNKSWDEKI FTETIEHQGR MVAVFGM
|
|---|
| |