| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2012 |
|---|
| Symbol | |
|---|
| ID | 3924680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 2266805 |
|---|
| End bp | 2267371 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637897621 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_503441 |
|---|
| Protein GI | 88603263 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1618] Predicted nucleotide kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.378806 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.962242 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAATT CAATGTCTGA CTGGAAACCA CCACGATTTA TCATCACCGG TGAACAAGGG
GAAGGAAAGA CAACACTTCT CCTGAAGATT CTTGCAGAAC TCACAAGTCA AGGAATCAGA
ATGCATGGTA TCGCGGCTCC GGGATATTTC AACGAAGGTA TCAGATCAGG TTTTGATGTT
CTGAATGTAC ATTCCGGGAG AACTGTAGAA CTCTGCTCGG CAATTCCAAC GGTAAACTCT
ATACAATATG GCAGGTATTA CTTTCGGTCA GAAGGCCTTG CCTTTGGGAA GGAGATATTA
AGTCAGGTAC CACTCCCAGG TCAGGTGGAT CTCCTTGTCA TTGATGAGGT TGGAAGGTTC
GAAATTGCGG GGAAGGTATG GGGAGAGAGT ATTGATCATA TCATGCAAGC ACCCCGCACA
CCGATGATCT GGACGGTCAG GAGATCCTTT GTTGATGCGG TCACAAAGCG ATGGCCGGTC
CAGAGACAGA GAATCATTGA AGTCGGGTCT GAAAACTACG ATGATTTCAT TCATGATGTG
ATAAATGAGA TCCGGCAATC GGTCTGA
|
|---|
| Protein sequence | MVNSMSDWKP PRFIITGEQG EGKTTLLLKI LAELTSQGIR MHGIAAPGYF NEGIRSGFDV
LNVHSGRTVE LCSAIPTVNS IQYGRYYFRS EGLAFGKEIL SQVPLPGQVD LLVIDEVGRF
EIAGKVWGES IDHIMQAPRT PMIWTVRRSF VDAVTKRWPV QRQRIIEVGS ENYDDFIHDV
INEIRQSV
|
|---|
| |