Gene Mhun_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1980 
Symbol 
ID3924387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2234175 
End bp2235242 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content44% 
IMG OID637897589 
ProductABC transporter related 
Protein accessionYP_503409 
Protein GI88603231 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.220202 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCACTAG AAATTATGGG ATTATCCAAA ACCCTCGGTG ATTTTCATCT CAGGAATGTG 
ACCCTGACAA TAGATGATAG TGAATATTTT ATCATTCTTG GACCTTCGGG AGCTGGAAAG
AGCCTATTAC TCGAGACTAT AGCGGGAATT TATTCTCCAG ATTCCGGAAA GATAATTCTG
GATGGTACTG ACATAACGGA TCGGCCGGCA CGACTTCGGC ATATAGGGAT GGTATACCAG
GATTACATGC TTTTTCCATA TCTGAACATA GAGAAAAACA TTGGATTTGG ACTGAGACAA
CTCAGGCACC CATCTCATGA CATCAGAAAA GCGACGGAAG GTATTGCTTC ACTTCTTGGA
ATTACCCACC TCTTATCCCG TCGTCCGGAT ACCCTAAGTG GCGGAGAACA GCAACGGGTA
GCCATTGCCC GTGCCCTTGT CATAAAACCG CGGATTCTTC TGCTCGATGA ACCATTGTCC
GCTCTTGACG CCATCACTCA TAAAAAAATG CGAAATGAGT TAGCAAGAAT CCCTATGCTT
ACAGGTGTGT CTGTCATTCA TATCACGCAT CATGCAGAGG ATCTTATCTC ACTTGGGCAC
CGAACAGCAG TCATGGACAA TGGAGCCATC GTGCAAATTG GAAGTCCTGA TGAGATCTTT
CAAAACCCCA AAACACCCTT TGTTGCTGCC TTCACCGGAA TGGAAAATTT ATTCTCCGGT
ATTGCAATGG ATAGTCATGA GGGGAAGGTG ATCAGGATTG GTCAGGTAAA AATACATGTC
ATCACCCCAT ATACCGGCCC GGTTCAATGT GGTATCAGAC CTGATGCTCT CATCTTTTCA
CGCGAACCTT TGAAATCCAG TGCACGAAAT GTCCTCATGG CAACGGTAAC AAAGATAAGA
CGAATGGGAT CCATTGCATG GGTAGTAATT GATTGTGGAA TTTTCCTAAC TGGTGTTCTA
ACCATTCAGA GTTTGTACGA ACTCAGGATT GATGAGGGGG ATACCATCTT TATTGCATTC
AAGGCATCAG CGGTAATGGT ATTTCCCGAA GAAACACAAA AAAAATAA
 
Protein sequence
MPLEIMGLSK TLGDFHLRNV TLTIDDSEYF IILGPSGAGK SLLLETIAGI YSPDSGKIIL 
DGTDITDRPA RLRHIGMVYQ DYMLFPYLNI EKNIGFGLRQ LRHPSHDIRK ATEGIASLLG
ITHLLSRRPD TLSGGEQQRV AIARALVIKP RILLLDEPLS ALDAITHKKM RNELARIPML
TGVSVIHITH HAEDLISLGH RTAVMDNGAI VQIGSPDEIF QNPKTPFVAA FTGMENLFSG
IAMDSHEGKV IRIGQVKIHV ITPYTGPVQC GIRPDALIFS REPLKSSARN VLMATVTKIR
RMGSIAWVVI DCGIFLTGVL TIQSLYELRI DEGDTIFIAF KASAVMVFPE ETQKK