Gene Mhun_1971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1971 
Symbol 
ID3924538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2222733 
End bp2224667 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content49% 
IMG OID637897580 
Producthypothetical protein 
Protein accessionYP_503400 
Protein GI88603222 
COG category[R] General function prediction only 
COG ID[COG4880] Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.666709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACCAC AGGCACCAAT GCGATCCCTG TTTCTTGCCG TGATCCTGAT AGCGGTATGT 
GCAGGGCTTT TCCAGGTATC CGGCACCGAT GCATCTGCAC CTGGAATGCT GGAGATAACC
ACCGATGAGG ATTTAAAAGA GTATATGAAG AATGTCACCT CTGAATACCG GTATGGCTAT
TCAAACGGGA TGTATTATGA TATGGCCATG GCAGTCCCAG AGATGGTATT GGCACCTGCT
CCCATGGCTG CAAAGGAGAT GGGAGCACCT GCCACGACCT CTGCAGGTTC AGACAAAGGA
GCAAGTGACT TTTCCACGAC CAACATTCAG GTTGCCGGAG TTGATGAAGC GGATTTTGTA
AAAAATGATG GAAAATATAT CTACATCAAG AGTGGAGATA CCCTTACCAT CGTCGATGCC
TTCCCCCCGC AGCAGGGGAA GATCGTGACT GAACTGCCGG TAAAAGGGTC AGTATCAGAG
CTTTTCCTTG CAGGGGACCG TCTTGTCGTC TTTACTGACA CGAATGACGA GCATTGGTAC
ACCCCGAAGG GATCGGCGGT TCCAATCCCT GATTATTCGA GAAAGACACA GGCCGTGATA
TATGACATCT CCGACCGGAA GAGCCCGAAG GAAGTCAGGA CAATCTCTGC CCCTGGAACA
TATTATAATG CCCGGATGAT CGGCGATTAT GTCTATGTTC TGACCAAAGA GACTCCTGAT
TACCATAATC CCCGGATGCC CATCATCTAT GACGGTACAG AACCAATTGA GATATCATCG
ATCTGGTGTC CCCCATCTCT GATGAATGAG TACCAGATGC ATACGTTGAC CTCATTTCCG
GTGACCGGGT CAGGGCAGCC CAAGGCTGAG TCATTCCTTC TGGGATATTC AAATACACTC
TATGTATCGC CGCAGAATGT GTATGTTGCC TATGAAAAAC AGCGACCCTG GTACGGGTGG
TACCTAACTG ATGAAAAATC AGCAGAATCA AAAGAACCAG AGCAGGAGTC GGTCATTCAC
CGGTTTGCGA TTAAAGATGG TGACATCGCA TACAAAGCAA CGGGAACTGT ACCTGGATAC
CTCTTAAATC AGTTCTCCCT GGATGAAAAC CGTGGAAATC TCCGGGTTGC AACAACTGTA
TCTGACTTTG CATCTGATGC CAGACAGTAT AGTAATGTCT ATGTCTTTGA CCCTTCGCTG
AAGATCATCG GTCGGCTCGA ACATCTAGCT CCTGATGAAA GGATCTACTC TGCACGGTTT
ATGGGAGACC TGCTCTATCT GGTTACGTTC AAGCAGACCG ATCCACTCTT CGTGATTGAT
CTCTCCAATC CCTATCAGCC CGGCCTCCTT GGAGAACTGA AAATCCCCGG ATATTCAGAT
TATCTCCATC CCTATGACGA GACTCACCTG ATTGGCATCG GAAAAGACAC CATGGAGAAT
GAATGGGGCG GAATTGTCCC GACCGGGGTG AAGATAGCCC TCTTTGATGT GAGTAATGTG
AATAATCCAC GACTTGTTGA GAGTATTGTC ATCGGAGAGA AGGGATCTGA CTCTGCCGTC
CTTTCAGACC ACCGGGCGTT CCTGCTTGAT AAGGAGAAGA ATATCATGGC AATTCCGATC
AGGGAGGTTG TTCACATACC GGTCCAGGGT AGCACGTATG AAGGATCCCA TACCGAGGAG
ACCTGGCAGG GGACATATGT ATTTGGTATT AACCCGGATA CCGGATTTAC TGAAAAAGGG
CGGGTTAAAC AGGGAACCGG TTCGTCAGAT GATGAATGGT GGTATGGGTC AACGGTGCTC
CGGTCACTCT TTATGGATGA TGTCCTGTAT ACGATATCCC GTGACCGTAT CGTCGGGTCG
GATCTGAAGG ACCTGACAAA GCGCCTCATG GACATCGGAA TCAAACATGA TGATCGACCG
TTCAGATATT ATTAG
 
Protein sequence
MIPQAPMRSL FLAVILIAVC AGLFQVSGTD ASAPGMLEIT TDEDLKEYMK NVTSEYRYGY 
SNGMYYDMAM AVPEMVLAPA PMAAKEMGAP ATTSAGSDKG ASDFSTTNIQ VAGVDEADFV
KNDGKYIYIK SGDTLTIVDA FPPQQGKIVT ELPVKGSVSE LFLAGDRLVV FTDTNDEHWY
TPKGSAVPIP DYSRKTQAVI YDISDRKSPK EVRTISAPGT YYNARMIGDY VYVLTKETPD
YHNPRMPIIY DGTEPIEISS IWCPPSLMNE YQMHTLTSFP VTGSGQPKAE SFLLGYSNTL
YVSPQNVYVA YEKQRPWYGW YLTDEKSAES KEPEQESVIH RFAIKDGDIA YKATGTVPGY
LLNQFSLDEN RGNLRVATTV SDFASDARQY SNVYVFDPSL KIIGRLEHLA PDERIYSARF
MGDLLYLVTF KQTDPLFVID LSNPYQPGLL GELKIPGYSD YLHPYDETHL IGIGKDTMEN
EWGGIVPTGV KIALFDVSNV NNPRLVESIV IGEKGSDSAV LSDHRAFLLD KEKNIMAIPI
REVVHIPVQG STYEGSHTEE TWQGTYVFGI NPDTGFTEKG RVKQGTGSSD DEWWYGSTVL
RSLFMDDVLY TISRDRIVGS DLKDLTKRLM DIGIKHDDRP FRYY