Gene Mhun_1929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1929 
Symbol 
ID3924126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2170640 
End bp2171863 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content52% 
IMG OID637897539 
Productbeta-lactamase 
Protein accessionYP_503359 
Protein GI88603181 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACAAA ACGAATATGG CTTCGGAAGG ATGGTCTTTC CCATCTTTTT CGTCCTCCTT 
TTGGTCTGCC TTCCGGTGGC AGGGCTCATG AGTCCGGAAG AGTGGCGGAT GACTGCTCCA
GGAAAATTTT CCACGCTCTC CGCTGAGGAG GTTGCCTCGA TTGCAGAGCC GCTTGTTGAT
AATGGAACAT ATCCAAGCCT TGTTATTATC CTGGAGGATC GGAACGGTTC TGCCCTTTAC
ACCTTTGGGA TGGCTAATCG TGCGACGGGT CAGGCTCCTG ACAACCGAAC CACTTTCGAG
GTTGGATCGG TTTCAAAGAC CTTTACCGGG CTATTGCTCG CCGATGCAGA GCTTCGGGGT
GTGATAAACC TGTCTCTCCC CATACAGACC TATGTTCCGG AGGGGGTGAC CGTCCCCTCA
TGGCAGGGCA GGGAGATTAC CCTCTCCGAT CTCGCTACCC ACACATCAGC ACTTCCCAAT
GTGCCTGATG ATTTTTACCG GTACCAGAAG GAGAGCGACC CAATCGAAAC TCAGGCTGAA
TCAACCTTCA GGGGATATGA GGAGATACCG GCAGATCTGG TATATGCATG GCTCTCAAAC
CTGACTCTGA CGCGATCTCC AGGTGATGAC TGGGAGTATT CAAACGCAGG GACGGCCATT
GCAGGAGATA TCGTTGCACG GGTCCAGAAC AGAACCTATC CGGAGCTCGT GAATGAGCGT
ATCCTCACCC CGCTTGGGAT GAAAAGCACC GCTGCAGGGT GGAACCCTGA GCTTTTGGAG
CGTTCTGCAG TTGGATACCG TGGGTATGCC CCGGACCATG ACGAAGGGAT GATCATCAGG
TACAATGAGT TCTGGACGCC AGCAGCGGGA ATCATCTCTG ATGCGGATGA CATGGCAGCT
TACCTTGCCC TGCAGCTCGG GTTTCTGGAT GTACCTGAAG AGCTCAGAAA AGCCGTCAAT
TTGTCACATG ATCCACGAAC CATCCGATCT ACTGAAGAGG TTGATCTCTG GCAGTCGCTC
TTCTGGGACA CGTTTGAGAC CGAAGGCATT CCCCAGACCC ATCTGAAGGC CGGAGAGACC
AACCGGTTCA TGGCTGATAT TGCATTTGTA AAGGACGAGG GGATTGGCGT TGTTGTTCTG
AGCAATGTGG CATACTTTTC AGATACTCAT GTTGAATCCG ATGTTGCCAT TCCACTCATT
AGACTGATGC TGGAGAAAAG ATAA
 
Protein sequence
MIQNEYGFGR MVFPIFFVLL LVCLPVAGLM SPEEWRMTAP GKFSTLSAEE VASIAEPLVD 
NGTYPSLVII LEDRNGSALY TFGMANRATG QAPDNRTTFE VGSVSKTFTG LLLADAELRG
VINLSLPIQT YVPEGVTVPS WQGREITLSD LATHTSALPN VPDDFYRYQK ESDPIETQAE
STFRGYEEIP ADLVYAWLSN LTLTRSPGDD WEYSNAGTAI AGDIVARVQN RTYPELVNER
ILTPLGMKST AAGWNPELLE RSAVGYRGYA PDHDEGMIIR YNEFWTPAAG IISDADDMAA
YLALQLGFLD VPEELRKAVN LSHDPRTIRS TEEVDLWQSL FWDTFETEGI PQTHLKAGET
NRFMADIAFV KDEGIGVVVL SNVAYFSDTH VESDVAIPLI RLMLEKR