| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1863 |
|---|
| Symbol | |
|---|
| ID | 3922657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 2103625 |
|---|
| End bp | 2104632 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637897479 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_503299 |
|---|
| Protein GI | 88603121 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03157] CRISPR-associated protein Csc2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGATA AAGTAATTCA GTCATTTTAT GCGAGTATTA AACCCTATAC TCTCGAAAAG
CCGGAGAGAA AACCAAAACA GAATTATGTC AGCATTCTTA TTCTTCGTGA GCTGCAGAGT
GCTGCACGTT TCACGACCGA TGGAACTGAA GCAAACTCAT CTATCATTCG GATTGGAGAT
GAAGAAGTGA CCGTTGGGAA ACTCTTTGGT AGAAAACAGG TTGCCAGTGA CAGGCGGATA
GCAAAAGCAT TACAAAGGGA TCTAATCGCT GAAAAGATGA ACTCCTTCTA CAAGAAAGGT
GGTTGGAGTG GGTGCTCGAT GGAAGTGACG AAGATGTGTC AGAAATGCCC TGAATGTGCA
TTATTTGGTA GTGCTGCATC AGAAGGTGAT ATGAGTGTCA CATCTCGAGT CATGTATGAT
GAAGCCTATA CCATTCGAGG TATTAATTCT GTAGTTGAAG AGTACTTTCA GAACGCTCCG
GGAGATGATT ATGCGAAGAA AGCGACATCA GGGATCCGTG AACCTGATTT CTTCAAGGAA
GGAACGTTAT TTCCCTGTGT TGTCACATTA CGTGATGTAA CTTGTGAAGA GGTCTTGTTC
TTTCTCAACA TTACCGACAG AAATACCCGG TATGGTGCGA CCGGGACACG GTTTGGTAAG
ACGAGAAATC ACATTTTAGG GGTATTTGCC TCAAATCGGG AAGGCCCTTC AAGTCTTGAA
ATTTCTCGGG GTGTCGCATT ACGGCTTGCC GGAGGTGATG AAGTACGTCT GCCTGATTCT
GAATCTTTGA AGAGGGTCTT GGAACTTGAC AGTCTGCCCC TTCATGATGT GAAAAAGAAT
GCTCTAGAAG TGTATCAACA TTTATTGAAG ACTCATAGGA TATCTGGGAT TGACCTTGGA
GAGTCAGAGG TGACTGCTCT TCTTGACGCA ATGAAGGATG ATGCAGTCAT AAAAGAAATT
CTGATCACTC AGATTGAAAA AATATCTGAT TTCCTGGCAG ATCAATAA
|
|---|
| Protein sequence | MADKVIQSFY ASIKPYTLEK PERKPKQNYV SILILRELQS AARFTTDGTE ANSSIIRIGD
EEVTVGKLFG RKQVASDRRI AKALQRDLIA EKMNSFYKKG GWSGCSMEVT KMCQKCPECA
LFGSAASEGD MSVTSRVMYD EAYTIRGINS VVEEYFQNAP GDDYAKKATS GIREPDFFKE
GTLFPCVVTL RDVTCEEVLF FLNITDRNTR YGATGTRFGK TRNHILGVFA SNREGPSSLE
ISRGVALRLA GGDEVRLPDS ESLKRVLELD SLPLHDVKKN ALEVYQHLLK THRISGIDLG
ESEVTALLDA MKDDAVIKEI LITQIEKISD FLADQ
|
|---|
| |