Gene Mhun_1799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1799 
Symbol 
ID3924448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2034208 
End bp2034696 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content54% 
IMG OID637897419 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_503239 
Protein GI88603061 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR02087] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTC TCAAAGGCTC CGGCCCTGCA GTCTGTATCG GAGAGGATAT CGATACGGAT 
CTGGTGATTG CCGGACGATA CCTGAGAACA AAAGACTGGA GTTTTTGGGC ACAGCATGTG
TTTGAGGATC TTGATCCTTC TCTTGCCGAA AGACTGAAAG GAGCAGTGCT TGTCGCCGGA
AAGAACATGG GTTGCGGGTC TTCACGGGAA CAGGCGGCCC GGGCTCTGCA TGAGGCAGGA
GTTCTTGCTG TCATCGCCCC TTCGTTTGCC AGAATTTTTT TCCGGAACTG CATCAATGTC
GGGCTTCCGT TACTGGAATG TGATCTGACC GGATGCACCG ATGGCATGAT CATCACTTTT
GATTGCACTG AAGGGTGGGT GGAGGTGGAT GGGACGCGGT ATCTCTTCCG GCCCCTCTCT
CCACGGATGC AGGAGATTCT CAGCACCGGC GGTCTGATTG AGTACTGGAA ACGGAGAAAA
GAGCGATGA
 
Protein sequence
MTALKGSGPA VCIGEDIDTD LVIAGRYLRT KDWSFWAQHV FEDLDPSLAE RLKGAVLVAG 
KNMGCGSSRE QAARALHEAG VLAVIAPSFA RIFFRNCINV GLPLLECDLT GCTDGMIITF
DCTEGWVEVD GTRYLFRPLS PRMQEILSTG GLIEYWKRRK ER