| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1649 |
|---|
| Symbol | |
|---|
| ID | 3924338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 1870458 |
|---|
| End bp | 1872110 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637897279 |
|---|
| Product | response regulator receiver sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_503099 |
|---|
| Protein GI | 88602921 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG2205] Osmosensitive K+ channel histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.181327 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.670777 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACCACT CATTACCTCA CCTGTTTCCA GTCCACGTCC TCCATGTCGA TGATGATGTC
CATATTCTGG AGGTCACCAA GGCGTTTCTT GAACGCTCCG GTCATATCCG GGTCTATTCA
TGTTCATCGG TACAGGAGGC ATTTGAACAT CTGACTGTGT ATTCGGTTGA TGTCTTCATC
TCCGACTATG AAATGCCGGA CATGAGTGGA ATTGAGCTTT TGCAAACAAT CAGAGGTCAT
GGATGTGATA TTCCTTTTAT TCTTTTTACC GGCCGGGGAA GAGAAAGTGT TGCGGTATCA
GCAATCAATT CAGGAGCCAC CTTTTACGTA CAAAAGGGAG GAGAGCCTCG TTCACAGTAT
GCAGAACTAT CTGATAAGGT CATGAAGGCA TACCGGCAGT ACCGGGATCA GCAAAAACTC
AGGCATCTCT CCCGGATATT TCAGGTTCTT CGGGAGGTAT CTGACACCAT TCATGGGAAT
GAAAGGAGAG AAGAGGTTTT TGCCCGTCTC TGCAGCAGGA TTACCTCTGA ACCCGGATAT
CAGAACATGC GTATCGTCCT GTTTGATGCA AATGGGAATG TGACCGGGGT GTATCATGCC
GGTCTTGAAG AGCAGATGGG CCGGTTCCTC TCGTATCTTC AGGCAGGGAA CCGGACATCC
TGTTACAAGA AGGCACTGCA AAGCAGGAGT GGCCCGGTTA TTTGTGCTCC TGATGAGACC
TGCGTATTAT GCCCGCTCTA CTCAGGTCAT CATGATGCCC ATACCCTGAC GGTCAGACTG
GAACATGCAG GAACGGTCTT TGGCATTGTA TCTGTGACTC TCGAGCCTGA ATATGCCCGG
GATCCTGACG AACAGGCGAT GGTGCAGGAT GTTGCACGGG AGATATCATA CGCTCTTCAT
CACTTTCTCC TCCAGGAAGA GCATAACGAG ATGGAAAATC TGATTGGGAC GAATAAAAAA
CTCGATATCC TCAATACGAT AACCCGGCAC GATATCAGGA ATGAACTGAC CGCCCAGCTC
TTTCATTATG ATAATCTGCT TGAACTTTCG CACAAGTATC CGGAGATTGC GCCTGATGTA
AAAGAATTGG GGATTTCTCT TAATAATATC CAGGAACATC TGATGTTCTC CGATGTATAC
CAGAAGATTG GTATTCAAAA ACCCCAGTGG CTTTCTATCT CCCGTATCAT CGAGAATATT
ACCCAGTCTC ATGGATTTGG CAATGTCTCC ATCCTCCATT CCACCGGGAC GCTTGAGGTG
TATACCGACC CGATGTTTGG AAAGATAGTC ATCAATCTTG TTGAAAATGC CCTGATGCAC
GGGAGCCGGG TTTCTGCAAT ACAAATTCGG TTTGTTGAGA GGATTGATAA TGGCCTTCTC
ATCATTGAGG ATGACGGGAT GGGTATTCCG GATAATAAAA AGAAGGTCAT CTTTGAACGG
GGAGTGGGCC GGAATTCAGG TCTTGGTCTT TTTTACACCC GGGAAATTCT GGGGATGACC
GGGATGAGCA TTACTGAGAA TGGAACCTAT GGAAAAGGTG CCAGGTTTGA GATATGTATT
CCGAAGAGTT GTTACCGGTT TTACAAAGGG GAGGAACTGA TGAACGCTTT ACACACTTCT
TTTGCAGGGC AGGTGCATGC CGATGATTCA TAA
|
|---|
| Protein sequence | MYHSLPHLFP VHVLHVDDDV HILEVTKAFL ERSGHIRVYS CSSVQEAFEH LTVYSVDVFI
SDYEMPDMSG IELLQTIRGH GCDIPFILFT GRGRESVAVS AINSGATFYV QKGGEPRSQY
AELSDKVMKA YRQYRDQQKL RHLSRIFQVL REVSDTIHGN ERREEVFARL CSRITSEPGY
QNMRIVLFDA NGNVTGVYHA GLEEQMGRFL SYLQAGNRTS CYKKALQSRS GPVICAPDET
CVLCPLYSGH HDAHTLTVRL EHAGTVFGIV SVTLEPEYAR DPDEQAMVQD VAREISYALH
HFLLQEEHNE MENLIGTNKK LDILNTITRH DIRNELTAQL FHYDNLLELS HKYPEIAPDV
KELGISLNNI QEHLMFSDVY QKIGIQKPQW LSISRIIENI TQSHGFGNVS ILHSTGTLEV
YTDPMFGKIV INLVENALMH GSRVSAIQIR FVERIDNGLL IIEDDGMGIP DNKKKVIFER
GVGRNSGLGL FYTREILGMT GMSITENGTY GKGARFEICI PKSCYRFYKG EELMNALHTS
FAGQVHADDS
|
|---|
| |