| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1420 |
|---|
| Symbol | |
|---|
| ID | 3924083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 1632669 |
|---|
| End bp | 1636034 |
|---|
| Gene Length | 3366 bp |
|---|
| Protein Length | 1121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637897052 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_502874 |
|---|
| Protein GI | 88602696 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0817518 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.492636 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATG ATCCTTCTGA ATTTTCTTCT GATCCTCTTC GTCTCCTCAT TATTGACGAT
GACGAGGTGG TCCTTCAGGC CACCCGCCAG TATCTGTCTG CTTTCTTTTC GTTTCATGTC
GATACTGCCC TTTCCGGCCA AAAAGCCCTT GCGTGTATGG CAGAACGCAA GTATGATGCA
ATAATTGCCG ATTATGAGAT GGATGGGATG AGTGGTCTTG ATCTGTTACA AGAAATACGT
TCCTCCGGAA ATGATATCCC ATTCATCATG TTTACCGGAA AAGGGAGAGA AGAGGTTGTC
ATTGCGTCCA TAGATAACGG AGCAGACGGG TACGTGCAGA AAGGGGGAGA GATTCGGTCA
CAGTTTACAG AACTTAGTCA TAAGATTACC ACCGTCGTGA AGAAAAAACG AGCTGAAAAA
GCACTTCTTC AGAGTGAAGC AGAGTACCGC CAGTTATATA ATGAATCTCC TTTGGCATTT
CTTTCTATTG ACCGGTCTAG TACTATTGTC AGATGTAATA CAAAGGCAGG AGAACTTCTC
GGATGCTCTC CTGATACCCT CATCGGGACT TCCTCTCTGG ATATCTATGC CGACCTTCCT
GAAGGCAAAA GCCGGTTTAT TGAGATATTT GATAGATTTC TGAAAGAGGG GGTGCATACC
GAGCGGGAAC TGATTATCTG CAGGGCTGAT AAAACGCACC GGTGGGTACA TCTTACTATG
GATGCCATTC GGGATGATTC CGGTCAAATT GTCCTGTGCA ACTCAATTTT ACACGATATC
ACTGAGAAGA AGCAGGCTGA ACATGACCTG CAAAAGGCAC AGAAACAACT CCGTGAGATT
CACCGACAGG CATGTATTGG TATCTGGGAC TGGGATATGC ATAAAGATCG GATCTTCTGG
TCAGATGAGC TCTGTCAGAT AATTGGCTGG AATCCTGACC TCCCTCCCCC CGATTATTCC
CGTCTGTCAG ATTTGTATGT ACCGGAGAGC TGGGGTAGAC TGCAGGCAGC TGTGACCTTT
GCCATTGAGA CCGGGAAACC ATATGACCTT GAACTCGAAC TCATCCGTCC TGATAAAACC
CGGGTATGGG TACGGGCAAC CGGAGGGCCG GTCTATGATG CAACAGGAAT GCTCACCGGA
CTGCATGGGA CAATGCAGGA TATTACCGAG AGAAAAAAAG CAGAGAAAGC ACTTATGGAG
AGCGAGGAGC GGTTTCGCCA GCTCTTCAAC AATGCATCAG ATATGATAAT TCTCCATGAA
ATAGGTCCGA ACGGGAAACC TGGGAAGATA CTTGAAGTGA ATGATGCCGC CTGTAGCACG
CTCGGGTATA CACGGGAAGA ATTTCTTTCT CTGCAGGTTA TCGATATCAA TACTAATGAG
AGTAACGAAC TCATTCCAAG GCTCACCCCT GCCCTGTTTG CAAAGAGACA TCTTACTTTT
GAGTGTACGC ATCAACGAAA AGACGGTTCA GTACTTCCGG TTGAGGTATC AGTCCATCTT
TTCACATTAC ACAACCAGGA AGTTGCCCTG GCAATCTCCC GTGATATTTC AGAGAGGAAA
CATAACGAGA AGATCAGGGA AGCAATACTA TCCGGGCTGA GGGATATATT AGTTGAATAT
GTTGACCGTG ATTTAAATGT CGTTTGGGTG AATCAGGCGA CATGTGACCG GTACGGGTTA
CCTGGCCAGA ATTTTCCCGG TGCCTGTTAC CGGTTTGTTC AGGGAAGAGA CAGCCCCTGT
CCTGGCTGTA CGGCATTGCA GGCAATAAAG ACCGGAACAT TTCAGGAAGG GGAAGTGACA
ACTCCTGACG GGCACTATTT TCTGGTCAGA AGCAATCCGG TTATCGAAAA CGGAATAGTA
ACCGGGGCAA TCCATATCGC GATAGATATC ACAGAGCGGA AACGTACAGA AGATGCCCTT
GCACGGTCAG AACAACGGCT CCATGACATC ATCGAATTTC TCCCCGATGC AACCTTTGTG
ATTGATAAGG AAGGAACAGT CATCGCATGG AATAAAGCAA TTGAGAAGAT GACAGGCGTT
CAGGCATCTG ATATTATCGG AAAGGGGAAT TATGAATACT CTCTCCCGTT CTATCTGGAA
CGAAGGCCCA TCCTTATTGA CCTCGCGATG CGGTATGATG ATACCATATC CCCATTATAT
GCAGATTTTA AAAACGATGA AGGCAAGGTC ATATCAGAAT CGATTATCAC TAATTTTCAA
GGAAATGATG TCATTCTCTG GAGTATTGCA TCCCCGCTCT TTGATAAATC AGGCTGGTTA
GCCGGGGCGA TTGAGTCCAT CCGTGACATA ACCTACCGAA AACAAACCGA AGATGCCCTC
CGGAAGGCTC ATGATACCTT AAAAACCGTG ATGGACAGTG TTGATGCCCT GGTGTATGTT
GCTGATATGC AAACCCATGA GATATTGTTC ATAAATCAGT ACGGAAAGCG GATATGGGGA
GATGTGATTG GCAAGATCTG TTATCAGTCA CTTCAGAAAG GTTTTGACCA GCCATGTAGT
TTCTGCACAA ATCACCTGCT TCTGGATGAA GCGGGCAATC CCACCAGGAC AATAACGTGG
GAATTTAAAA ATATGATCAC CAAACGGTGG TATCAATGCC GGGATAGTGC CATCAGGTGG
ATAGATGGCA GAATTGTCCG TCTTGAGATA GCAACGGATA TCACCGAACA GAAAACAGTT
GAATATGCTC TTCGTCAGGC AAACCGTCAA TTGAACATGC TCTCTGGGAT TACCCGGCAT
GATATACTCA ATACGGTCAA TGCGGTGCAG CTCTTTTTGG AGATCGCAAA ATCAAAGGTG
GATACTACTC CGGCAGATCA AGATTTCAAG CATATTGACC ACGCGATCTC GCTTATTCAG
TCTCACATAG AATTTACAAG GGTATATCAG GATCTGGGAT CTCATGAACC GGTTTGGCAT
CGTCTCTCAT CTCTTATTCA GGCTGTCTTC TCGAGGTTCT CTGTTCATAT CGTCAATACT
GCTGATGATA TTGAGCTTTA CGCAGATCCC CTGGTTGTCA AGGTCTTTGA AAATCTGGTT
GATAATTCAA TACGGCATGG CCAAGGCGTC ACCCGGATTC AGATTTCAAG CCAGATACAT
GAAGATGAAG CTGTGATCCT GTTTGAAGAT GACGGGGCCG GTATTTCATA TGAGGAGAAA
GAACAGATCT TTGAGAGAGG GTATGGGAAA AATACCGGTC TTGGGTTGTT TTTCATTCGT
GAGATCCTTT CTGTTACCGG TATCTCCATC CGGGAGACCG GCCAGCCGGG GACTGGTGCC
AGGTTTGAAA TTACCATTCC GTTTGGAATA TGGAGGATGC ATTATAAGGA AGGGGGAAAG
CAGTGA
|
|---|
| Protein sequence | MTDDPSEFSS DPLRLLIIDD DEVVLQATRQ YLSAFFSFHV DTALSGQKAL ACMAERKYDA
IIADYEMDGM SGLDLLQEIR SSGNDIPFIM FTGKGREEVV IASIDNGADG YVQKGGEIRS
QFTELSHKIT TVVKKKRAEK ALLQSEAEYR QLYNESPLAF LSIDRSSTIV RCNTKAGELL
GCSPDTLIGT SSLDIYADLP EGKSRFIEIF DRFLKEGVHT ERELIICRAD KTHRWVHLTM
DAIRDDSGQI VLCNSILHDI TEKKQAEHDL QKAQKQLREI HRQACIGIWD WDMHKDRIFW
SDELCQIIGW NPDLPPPDYS RLSDLYVPES WGRLQAAVTF AIETGKPYDL ELELIRPDKT
RVWVRATGGP VYDATGMLTG LHGTMQDITE RKKAEKALME SEERFRQLFN NASDMIILHE
IGPNGKPGKI LEVNDAACST LGYTREEFLS LQVIDINTNE SNELIPRLTP ALFAKRHLTF
ECTHQRKDGS VLPVEVSVHL FTLHNQEVAL AISRDISERK HNEKIREAIL SGLRDILVEY
VDRDLNVVWV NQATCDRYGL PGQNFPGACY RFVQGRDSPC PGCTALQAIK TGTFQEGEVT
TPDGHYFLVR SNPVIENGIV TGAIHIAIDI TERKRTEDAL ARSEQRLHDI IEFLPDATFV
IDKEGTVIAW NKAIEKMTGV QASDIIGKGN YEYSLPFYLE RRPILIDLAM RYDDTISPLY
ADFKNDEGKV ISESIITNFQ GNDVILWSIA SPLFDKSGWL AGAIESIRDI TYRKQTEDAL
RKAHDTLKTV MDSVDALVYV ADMQTHEILF INQYGKRIWG DVIGKICYQS LQKGFDQPCS
FCTNHLLLDE AGNPTRTITW EFKNMITKRW YQCRDSAIRW IDGRIVRLEI ATDITEQKTV
EYALRQANRQ LNMLSGITRH DILNTVNAVQ LFLEIAKSKV DTTPADQDFK HIDHAISLIQ
SHIEFTRVYQ DLGSHEPVWH RLSSLIQAVF SRFSVHIVNT ADDIELYADP LVVKVFENLV
DNSIRHGQGV TRIQISSQIH EDEAVILFED DGAGISYEEK EQIFERGYGK NTGLGLFFIR
EILSVTGISI RETGQPGTGA RFEITIPFGI WRMHYKEGGK Q
|
|---|
| |