Gene Mhun_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1417 
Symbol 
ID3923560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1626497 
End bp1629664 
Gene Length3168 bp 
Protein Length1055 aa 
Translation table11 
GC content47% 
IMG OID637897049 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_502871 
Protein GI88602693 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2202] FOG: PAS/PAC domain 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0587691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.569805 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCTTC ATGAATCACT TAATCTTCAC CCCAAAATAC CTCTCTATTC ACTTTTTTTC 
ACGTCTCTTT TTGTGATCAT GCTGAGCATT GTGTCGCTTA CCTATGGGAT AACCATCGTC
TTTCAAAACC TCTATTACTT CCCGATAATT ATCGCCTGTG CATTTTACCT CCGGCGAGGG
TTCATCTTCT CACTGGTTCT CATCGGGGTA TACGGCCTTC TCATCGCCGT ATATGGGCCC
CACCAGTCAG AGGTCTATTC TGCTTTGGCC CGTATTGCCA TATTTATACT AGTCGCCGGA
GTGGTGACCT GGCTTTCATC CCGATATTCT GAACAGACTT CAGATCTCAT GGTGAGTGAA
AAAAAGTTCA GACGATTATT TGATGCCAAT GATGCAGGGA TTGCTCTTCA TGAAGTCATC
TGTGACAGTA CCGGAAAAGC GATTGATTAC CGGTTCATTA ATGTAAATCC TGCATATGAA
CAGATGACCG GTCTGAAGGC ATCTGATATT ATCGGAAAAA CGGTCCGTGA GGTATTTCCC
GGTAATGAAG ATGACTGGAT TGAGACCTGT AGTGATGTAA CAGCAATGGA AAAGAAGATC
CATTTTGAAT ATTTCAACCG TAAGCTTGGC AGATACTATG AAGGGACTGC ATATTCGCCA
GAACCTGAAC GTCTTGTCCG CATTATACGG GATGTCACTG AAAGAAAACA GCAGGAGTAC
CAGCTTTTAG AGACAAACGC CTATCTGGAA AACCTCATCA CCCATGCAAA TGTCCCGATC
ATCATCTGGG ATACCGGGTT TTCCATCACC AGGGTTAATC ATGCCTTTGA GATCCTCACC
GGAATACCCG CCGGACATCT GGTAGGGAGG CACCTATCCT CTCTTTTTCC CCAAGATGAG
GCAGAAAGGT CAATGCAGTT TATCCAGAAG ACTGGTGAGG GGGTTCGGTG GGAGACGGTT
GAGATACCAA TTATCCACCA GGATGGTACG CTTCGCACGG TACTCTGGAA TTCTGCTACT
ATCTATGATT CTGACGGGAA AAACCCGGTT GCGACGATTG CCCAGGGACG TGATGTAACT
GCCGAACGAT TCCTTGAGCG GGAAAAAGAG CGTGCAGCAG TACAGATCCA GGAAAACATT
GCCCAGCTTG CCATCCTGAA TGACGGTATC AGAAACCCTC TTACCCTCAT CTCCATCTAT
GCGGATATGA GCGAAGATGT TCGGATAACT GCTCAAATCC AGAACGAAGT AAAAAGAATC
GATGAGATGG TCACAAATCT TGACCGTGAG TGGGTTCATT CAGGGAAGAT TCTGGATTAT
CTGAGAAACC ATGATATGGT GGCCTTTGAT TTTGTTCCCA GTTATTCTCC CGGTTCACCA
GTCCCATCGG AAGCACCACC CCCTGACCGA CCGGAGCAGG TTATTTCATC CCCCCAGGTC
AGCGGGTATG AACGCTATAT TGAGGAGATT CAGGCCAGAC TCTACTCTAT CCTCGATAGT
GTTGATGCGT ATATCTTTGT TTCAGATTTA GACTCCTATG ATATTTTGTA CATCAATGAA
GAAGGGAGAA ATATCTTTGG GAATGTCATT GGCCAGAAAT GTCACACCTG TATGTATGAT
AATGCTGATA GCCCCTGTTC CTTTTGCACA AATAAGTTCA TACTGGAGAA GACGGATCCA
ACTGGGCTCA TGAAAGGGGA ATTTATCCAT CCAAAAACCG GCAGATGGTA CGATTGTCGT
GGCCGGGCAA GAGATGAACT GATACAGGCA AGCAGATACC ACCGGACTTT GATTGAAACC
AGTCCTGACC CTCTGATAAC GATCGGAAGG GACGGGAAGA TCACGGATGT CAACACGGCA
ACCGAAACGG TATCCGGATA TACCAGAAGT GAACTCGTGG GTACTGATTT TTCAGAATAC
TTTACCGAAC CTGAAGAAGC CAGGGCCGGG TATCTGATGG TGTTTGAAAA AGGTGAGGTC
CGTGATTATC CTCTTGCAAT CCGGAAAAAA GATGGGGCAA TTATTGATGT GCTCTACAAT
GCCTCTGTCT ACCTGAATGA AATGGGTGAG ATTGCCGGAG TATTTACTAC AGCACGGGAT
ATCACTGAGC GAAAGAAGGT AGAGAAGAAA CTGTACCAGC AGGAAGAACG ATATCGTCTG
GCATTACAGG CAACCAATGA TGTCATCTGG GATTTTGACG TCATAAACGA TGCACAACGC
TGGAATGAGG TCGGGATAGA GGTATTCGGG TGGTCGGATA TTGTATTTTC TGATCAAACC
GCGGCATGGT GGACTGACCG GGTTCATCCG GAAGATCGGG AGCGGGTTGC AGAAGGATTT
GATACAGCAC TGGAAGACCC CACTTGCACA AACTGGCATG ATGAGTATAG ATTTAGGAGA
TCTGACGGTG TATATGCATA TGTGATGGAC CGGGGCTGCA TCCTTCGAAA TCCAGGGGGC
GTTGCCATCC GGATGATTGG TGCCATGCTT GATATCTCTG AGCGGAAGAA GGCAGAGGAA
GCCCTTCGGC ATGCAAACCG TCAGATTAAT CTTCTGTCCA GCATTACCCG GCATGATATC
ATCAATAAAA CCACGGTCAT CTTTAACTCG CTGGGAGCTG CCGAGATGGA TATTTCGGAC
CCTTCCGTAC TCCATCAGAT CGATGTTATC AGATCAGCAA CACAGGCAAT AAAAAGCCAG
ATTGAGTTTA CCCGGGTATA TCCGAATCTG GGCACTCACG AACCTCAGTG GTCCCGGCTG
GAAACCCTCC GGTTATCAAT CCCGATTAAC GTTGAGTATA CATCAATGAC CGGCGACTAT
GAAGTCTATG CAGATCCCAT GTTCAGCCAG GTATTCAGTA ACCTTCTTGA TAATTCTCTC
CGACATGGGG AGCGGGTAAC CAGGATCATG CTCACAACCC ATCTGGAGGA AGACTCCCTC
ATTATCAGGT GGGAGGATAA CGGGGCTGGC ATTCCATTTG ATCAAAAAGA ACAGATTTTT
GAGCGTGGGT TTGGAAAAAA CAATGGCTTT GGGCTTTTCC TTGTCCGTGA AGTACTTCAG
ATTACCGGGA TGAGCATTCG TGAAACCGGG AATTTCGGGT CCGGAGCGGT GTTTGAGATT
ATTGTGCCAA AAGGGGTATA CCGGACCATG CACCCCACCG GAGAGTAA
 
Protein sequence
MLLHESLNLH PKIPLYSLFF TSLFVIMLSI VSLTYGITIV FQNLYYFPII IACAFYLRRG 
FIFSLVLIGV YGLLIAVYGP HQSEVYSALA RIAIFILVAG VVTWLSSRYS EQTSDLMVSE
KKFRRLFDAN DAGIALHEVI CDSTGKAIDY RFINVNPAYE QMTGLKASDI IGKTVREVFP
GNEDDWIETC SDVTAMEKKI HFEYFNRKLG RYYEGTAYSP EPERLVRIIR DVTERKQQEY
QLLETNAYLE NLITHANVPI IIWDTGFSIT RVNHAFEILT GIPAGHLVGR HLSSLFPQDE
AERSMQFIQK TGEGVRWETV EIPIIHQDGT LRTVLWNSAT IYDSDGKNPV ATIAQGRDVT
AERFLEREKE RAAVQIQENI AQLAILNDGI RNPLTLISIY ADMSEDVRIT AQIQNEVKRI
DEMVTNLDRE WVHSGKILDY LRNHDMVAFD FVPSYSPGSP VPSEAPPPDR PEQVISSPQV
SGYERYIEEI QARLYSILDS VDAYIFVSDL DSYDILYINE EGRNIFGNVI GQKCHTCMYD
NADSPCSFCT NKFILEKTDP TGLMKGEFIH PKTGRWYDCR GRARDELIQA SRYHRTLIET
SPDPLITIGR DGKITDVNTA TETVSGYTRS ELVGTDFSEY FTEPEEARAG YLMVFEKGEV
RDYPLAIRKK DGAIIDVLYN ASVYLNEMGE IAGVFTTARD ITERKKVEKK LYQQEERYRL
ALQATNDVIW DFDVINDAQR WNEVGIEVFG WSDIVFSDQT AAWWTDRVHP EDRERVAEGF
DTALEDPTCT NWHDEYRFRR SDGVYAYVMD RGCILRNPGG VAIRMIGAML DISERKKAEE
ALRHANRQIN LLSSITRHDI INKTTVIFNS LGAAEMDISD PSVLHQIDVI RSATQAIKSQ
IEFTRVYPNL GTHEPQWSRL ETLRLSIPIN VEYTSMTGDY EVYADPMFSQ VFSNLLDNSL
RHGERVTRIM LTTHLEEDSL IIRWEDNGAG IPFDQKEQIF ERGFGKNNGF GLFLVREVLQ
ITGMSIRETG NFGSGAVFEI IVPKGVYRTM HPTGE