| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1378 |
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| Symbol | |
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| ID | 3923888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | - |
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| Start bp | 1576077 |
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| End bp | 1577225 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637897015 |
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| Product | CRISPR-associated Cse4 family protein |
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| Protein accession | YP_502837 |
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| Protein GI | 88602659 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01869] CRISPR system CASCADE complex protein CasC/Cse4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0035432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.385916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGAAT TTATCCAGAT CCATATGCTT GCATCGTATC CGCCATCCAA TCTGAATCGT
GACGATCTTG GGAGACCCAA AACTGCCACG GTGGGAGGAA CACAGCGTAT TCGTGTATCG
TCGCAAAGTC TGAAAAGATC ATGGCGGACA TCAGAGGCAT TTTCAGATGC ACTTAAAGGG
GCTATTGGTA TCCGAACCAG GGATATGGGG GTGAAAATTA AAAAAGCTCT GGTGGAGGGG
AGGTTATTAT CCGATATCCT TGAGGGAAAA GAGTCTGGAG TGACGAGGGA GAGGATAAAA
GATGAGAAGA AAGCTCATGA GTGGGCGGTA AAGATAAGTT CTCATTTTGG GAAGATCGAG
GGAGGAAAAG AGAAGGATTC AGATAAGAAA TCTGAAAAAA CAGATGAAAA GAGTAATAAA
AATCCTCTCT CCCATAAGCA GATGGTTCAT TATAGTCCGG AAGAGATTGC TGGAATTGAT
GATCTTCTTG GTCGGATTTC TGGTGGTGAA AAAGTATCAG ATGATGATTG TATTCGACTT
CGATCCGATC ATAAAGCTGT TGATATTGCT TTATTCGGAC GTATGCTTGC AGATAATGCA
GCATATAATA CTGAGGCAGC AGTTCAGGTT TCCCATGCTA TAACGGTGCA TGACACGCCG
GTTGAAGATG ACTATTTTAC AGCAGTTGAT GATCTCAATC AGCTTGATGA TACTGCCGGA
GCAGGGCATA TTGGTGAAGC AGAGTTTGGT GCAGGTCTTT TTTATACCTA TATCTGTATT
AACCGTGATT TATTGAAAGA AAATCTTCAA GGTGATAATG AACTTTCGAA CCGGGCAATT
GAGGCTCTTA TTCGTGCCGC TTCCATGGTT AGCCCATCAG GGAAACAGAA TAGTTTTGCA
TCACGGTCAT ATGCGTCATA TCTGCTTGTT GAAAAGGGTA CAGAGCAGCC GCGTTCTCTT
GCAGCCGCCT TTTTCAAACC CGTTTCGGGG AAGGATATCT ACGGAGATGC TGTGAAAAAT
CTTGAGGGTC TTCGGGATAG GATGGATAAT GCATATGGGA CTTCTTTTAA GCAATCGTCC
AGATCCATGA ATGTTATTGA TGGAACAGGG AGTCTGACTG ATATTATCTC ATTTGTGTTA
GAGTCATGA
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| Protein sequence | MSEFIQIHML ASYPPSNLNR DDLGRPKTAT VGGTQRIRVS SQSLKRSWRT SEAFSDALKG
AIGIRTRDMG VKIKKALVEG RLLSDILEGK ESGVTRERIK DEKKAHEWAV KISSHFGKIE
GGKEKDSDKK SEKTDEKSNK NPLSHKQMVH YSPEEIAGID DLLGRISGGE KVSDDDCIRL
RSDHKAVDIA LFGRMLADNA AYNTEAAVQV SHAITVHDTP VEDDYFTAVD DLNQLDDTAG
AGHIGEAEFG AGLFYTYICI NRDLLKENLQ GDNELSNRAI EALIRAASMV SPSGKQNSFA
SRSYASYLLV EKGTEQPRSL AAAFFKPVSG KDIYGDAVKN LEGLRDRMDN AYGTSFKQSS
RSMNVIDGTG SLTDIISFVL ES
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