| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1377 |
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| Symbol | |
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| ID | 3923372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | - |
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| Start bp | 1575343 |
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| End bp | 1576020 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637897014 |
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| Product | CRISPR-associated Cas5e family protein |
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| Protein accession | YP_502836 |
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| Protein GI | 88602658 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01868] CRISPR system CASCADE complex protein CasD/Cas5e |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00215137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.352446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGGTGAAA TGCGGTCTTC ATGGTCAAGA CCGTCCCGGT CAGCGGTTCT TGGAATGGTT
GCTGCAGCCC TTGGTATTCG TCGGGATGAT GAAGAAGCCC AGAACAGACT CCAGGCCGGA
TATGGGTTCT CGGTGATGGT CCTGCAACCT GGCATAATGA TTCAGGATTT TCATACCATT
CAGTCAGTCC ACTCATCTTC TTTGAAGAAA ATGAATCATG TGATGACCAG GAGGGATGAG
ATGAATCTTG GGGATTCGGA AACAATTCTT TCTCGTAGGG AGTACCTGTG TGATCATGTT
TCTGTTGCCT GTGTATGGAT CCGTGATGCT GAGTCAGCTC AGTTCTCTCT TGAGGAGATT
GCAGCATCGT TTCGAAATCC TGTTTTTTGT TTGTATCTGG GGAGAAAATC CTGCCCTCCT
GCCCTTCCTG TTCATGCACG GGTCATACAG GCTGATTCAT TGAAGTCAGC CCTGGTTCAG
CATATCGAGG GGTTTGATCT CCTCAATGGT TTCAGAGTAC CGGATCGGGT GTCTCTCTAT
TTTGAGGATG GTATTGATAT CGGATTTGAT GACCCGGTGA TGGTGATGAA GAGGCGTGAT
AATATATTAT CCCGGTCGAG GTGGCAGTTT TCTGACCGTA ATGAATATTA TGCTCGTATT
TCTGTTTCCG AGGTGTGA
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| Protein sequence | MGEMRSSWSR PSRSAVLGMV AAALGIRRDD EEAQNRLQAG YGFSVMVLQP GIMIQDFHTI
QSVHSSSLKK MNHVMTRRDE MNLGDSETIL SRREYLCDHV SVACVWIRDA ESAQFSLEEI
AASFRNPVFC LYLGRKSCPP ALPVHARVIQ ADSLKSALVQ HIEGFDLLNG FRVPDRVSLY
FEDGIDIGFD DPVMVMKRRD NILSRSRWQF SDRNEYYARI SVSEV
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