Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_1328 |
Symbol | |
ID | 3922846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 1515552 |
End bp | 1516094 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637896965 |
Product | hypothetical protein |
Protein accession | YP_502787 |
Protein GI | 88602609 |
COG category | [S] Function unknown |
COG ID | [COG1720] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00104] probable methyltransferase, YaeB/AF_0241 family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00949818 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00397758 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACAAAAA GCACCATTCA GGATACTACT ATTTGTATTA CACCCGTCGG AATCGTGAAA AATAATCTTC TTGCTCCACC TCTCATAGCC GGAAAAGACG GCCTTGAGCA TAACCAGGCA TGTACTTCTG CCATGAAAGA CATGACCGAT ACCAATACCC GTGTTTCAGA GATTATTCTC TCCGAAGAAT TCTCAGAGCT TCTCGAGGGT ATTGAAGAAT ATTCACATGT AATAATCCTG TACTGGGGAC ATGAGGTCCC AGTCTCCGGG AGGACAATGA AGAAAACCCA CCCGGCTGGT ATGACCAATT ATCCAAAACA GGGAATTTAT GCAACATACA GCCCTGCACG GCCTAACCCG GTATTGATGA CAGTCGTTCA ACTGGTGAAA AAAGAAAAAA ACCGGCTCTA TGTATCCGGC CTTGATGCCA TCAATAACAG CCCGGTGCTT GATATCAAAC CATATGTTCC CCTCTTATTT CCTCAGGAAG GAGTAATCAT CCCTGAGTGG ATGACAAAGA TCATGACAGA ATTTCATTCG TAA
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Protein sequence | MTKSTIQDTT ICITPVGIVK NNLLAPPLIA GKDGLEHNQA CTSAMKDMTD TNTRVSEIIL SEEFSELLEG IEEYSHVIIL YWGHEVPVSG RTMKKTHPAG MTNYPKQGIY ATYSPARPNP VLMTVVQLVK KEKNRLYVSG LDAINNSPVL DIKPYVPLLF PQEGVIIPEW MTKIMTEFHS
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