| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1317 |
|---|
| Symbol | |
|---|
| ID | 3922861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 1502395 |
|---|
| End bp | 1503234 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637896954 |
|---|
| Product | ribosomal RNA adenine dimethylase |
|---|
| Protein accession | YP_502776 |
|---|
| Protein GI | 88602598 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG0500] SAM-dependent methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.222413 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0120668 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCTG ATTCTAACAT TAACTGGAAT GAGATCTGGA AAAACACATT TGAGAATCAC
ATGATCTCCC GTGGTCAGGG GGAATATGCT CTCATGTGGG ATACAAAGGA AAAAGCCGAA
AAATATCTCC AGATGATGAA TCAAAACCCT GAAAGGACTG AAAAGATTAT CTCGCAACTT
TCTTTCTCTC CCGAATTCAG GATTCTTGAT ATTGGGGCAG GTCCTGGCAC TCTGTCAATT
CCCATCTCTG GAAAAGTGCA TCATGTTACC GCTGTAGAAC CAGCCATCGG GATGGCAGAA
CTGCTAAGGG AACGAACGAA AACAGAAACG AAAGGAAATA TCGATATTGT TCAGAAAAGA
TGGGAAGATA TCGATATACA AAAGGACCTG ACTCCCCCCT ATGATATGGT CATTGCTTCG
TATTCTCTGG TTATGCTGGA CCTGAAACAG GCCATTGAAA CCATGCAAAA AGTATGCTCC
GGCGAGATAT GGCTGTTCTG GATGGCTGGG ATGAACAGCT GGGAAGACCA TATGAAAAAA
CTCTGGCCGG TTATTCATGG GAGATCCTTT ACCTCACCAC CGAAAGCCGA TATCCTGTTT
CAGGTTCTGT ACCAGATGAA TATCTATCCA AATATGTCGG TCATGGAAAT GGAACATGTA
AAGACATATC CTACCATTGA GGAGGCAGTT CTGGAGACGA GAAAACAACT GAACTGCTCC
GCAGATTATG ATGATCAGAT TCGGGAACTA GTACTCCCAG GCCTGATTTA CCAGAATGGG
ACATACATCA ATCAGGAACG GTACAAGAGC GTTTGTTTTT CATGGAAAAA TGAAACATGA
|
|---|
| Protein sequence | MAADSNINWN EIWKNTFENH MISRGQGEYA LMWDTKEKAE KYLQMMNQNP ERTEKIISQL
SFSPEFRILD IGAGPGTLSI PISGKVHHVT AVEPAIGMAE LLRERTKTET KGNIDIVQKR
WEDIDIQKDL TPPYDMVIAS YSLVMLDLKQ AIETMQKVCS GEIWLFWMAG MNSWEDHMKK
LWPVIHGRSF TSPPKADILF QVLYQMNIYP NMSVMEMEHV KTYPTIEEAV LETRKQLNCS
ADYDDQIREL VLPGLIYQNG TYINQERYKS VCFSWKNET
|
|---|
| |