Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_1270 |
Symbol | |
ID | 3925225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 1441475 |
End bp | 1443439 |
Gene Length | 1965 bp |
Protein Length | 654 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637896910 |
Product | beta-lactamase-like |
Protein accession | YP_502732 |
Protein GI | 88602554 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2015] Alkyl sulfatase and related hydrolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0378122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.670777 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTATGTT CACATATGAA ATTTTTCAGG GTTTTGATCA GTATTCTCTG TCTCGTTTTG ATATGCGGGA CAGGATTTGC GGATAACAGG AATGATGCAT CAGAGTACAC CATTGCTATC CATGAAAAAA TGAATGACAC TCCAGCCTGG GATAACAATG ATGAAGATTT TGATTTTGCA ACCAGGGGTT TTATTGCGAC GGATGATCCG CTGACTATCC CTTCGGTATA TCCCGGGTAT ATTTCATGGG ACATGGAGGC ATATAAATAT CTGAATAATG ATACCCGTCC GGATACGATT AACCCGCTTT TGTATAGACA GAGCCAGTTG AATAACATCA ACGGTCTGTT TGAAGTCACC GATGGGATAT ACCAGGTAAG GGGATATGAT GTCACCAGTA TGAGCCTTAT CAAAGGAGAT ACCGGTTGGA TAGTCATTGA CCCGATGACT TCCGTGGAAA CTGCACAAGC TGCAATGGAA CTCGTGAATA GATCACTTGG AGATTTTCCC GTTAAAGCCG TCATCTATTC TCACCCCCAT GCTGATCACT ACCAGGGCGT AAAGGGAGTC ATTACCGAGG AGGAAGTAAA GACGGGTGAT GTCCAGATCA TCGCACCCGA GCATTTTATG GAGCATGCTC TCAGTGAAAA TGTATATGCA GGCAATGCCA TGCAACGAAG AGCGACCTAC CAGTACGGTA TTCAGCTTCC AAAGGATGCA AAAGGGAATG TCGATATAGG TCTTGGGAAA AGTCCATCTG TTGGAGTTGC TTCACTCATC GCTCCTACCA TTGATATCAC CCATACCGGA CAGAAGGTCT CCATTGATGG AATAGACATG GAATTCCATC TGACAACAAA TACCGAAGCA CCGGTAGAAC TTGACATATG GTTCCCCCAG AAAAAAGCCC TCCTGATGGC AGAAGACTGC ACGGCAACGC TCCATAATGT TCTGACACTC CGTGGAGCAC AGGTCAGGGA TCCGCTCGCC TGGGCAAATG CTCTTGATGA AGCCAGGCAG TTATACGGAG ATCAAGCTGA GGTGGTCTTC TGTTCCCATC ACTGGCCCAG ATTCGGGAAT GATAAAGTTA TAGAACTCCT CGAAAACCAG AGGGATTTAT ACAAATACAT CAACGACCAA ACCCTGAATC TCATCAACAA AGGATATACC ATGGATGAGA TCGCGAGTAT GATTGAACCT CCCGAATCTC TCAGGGAATT CTGGTACACT TACGGATTTT ATGGCCAGAT CTACATGGGA GTCAAAGCGA CCTACCAGAA ATATCTGGGC TTTTATGATG GCAATCCGAT TAACTTAAAA CGCCTTCCAC CGGAGGAATT TGCCTCATAC ATGACCGAAT ACATGGGAGG GGCTGAGTCC ACTATGATCC GGCTGCAGGA GCATTATGAT GCTGGGGAGT ATGAACTGGT TGCCTCAATT GCACATTACC TCGTCTTTGC CGATCCAACC AATATGGCTG CACGGGAGAT AGAAGCTGCT GCACTTGAAC AACTCGGATA TCAGACAGAG TCAGGAACTG CACGAAATGC ATACCTGTCA GCAGCCCAGG ATCTCAGACG GGAAGAGCCG ATAAAAGAGA TGAGCGGGAT TTCCGAAGAT ATTATGAAGG CCATGACCAT GAGCCAGTTA CTTGATTATA TCTCTGTCAG GGTTAACAAG GAAAAAGTCA ACGGTGAGAA TTACCAGATG AATTTAATAT TATCAGACTC CGGAGACAAG GCTTTGATAC AAGTAAAAAA TGATGTGCTT GTCTATCGGG TTGATGTACA ATCATCCGAA GCAGATGTAA CGGTGACCAT GCCTCGAAAG ACCCTTGAAC AACTTGCCCT CAATCCGACA CTTGCACTGG AAGATGTCAC CGTAACCGGA GATTCAGGTT TGTTTGACCG GTTTGTCAGT ATGCTTGATG TATTTGATCC AGGGTTCAAT ATTGTCCTTC CCTAA
|
Protein sequence | MLCSHMKFFR VLISILCLVL ICGTGFADNR NDASEYTIAI HEKMNDTPAW DNNDEDFDFA TRGFIATDDP LTIPSVYPGY ISWDMEAYKY LNNDTRPDTI NPLLYRQSQL NNINGLFEVT DGIYQVRGYD VTSMSLIKGD TGWIVIDPMT SVETAQAAME LVNRSLGDFP VKAVIYSHPH ADHYQGVKGV ITEEEVKTGD VQIIAPEHFM EHALSENVYA GNAMQRRATY QYGIQLPKDA KGNVDIGLGK SPSVGVASLI APTIDITHTG QKVSIDGIDM EFHLTTNTEA PVELDIWFPQ KKALLMAEDC TATLHNVLTL RGAQVRDPLA WANALDEARQ LYGDQAEVVF CSHHWPRFGN DKVIELLENQ RDLYKYINDQ TLNLINKGYT MDEIASMIEP PESLREFWYT YGFYGQIYMG VKATYQKYLG FYDGNPINLK RLPPEEFASY MTEYMGGAES TMIRLQEHYD AGEYELVASI AHYLVFADPT NMAAREIEAA ALEQLGYQTE SGTARNAYLS AAQDLRREEP IKEMSGISED IMKAMTMSQL LDYISVRVNK EKVNGENYQM NLILSDSGDK ALIQVKNDVL VYRVDVQSSE ADVTVTMPRK TLEQLALNPT LALEDVTVTG DSGLFDRFVS MLDVFDPGFN IVLP
|
| |