| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1243 |
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| Symbol | |
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| ID | 3922780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | - |
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| Start bp | 1416189 |
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| End bp | 1417703 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637896885 |
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| Product | isopropylmalate/citramalate/homocitrate synthase |
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| Protein accession | YP_502707 |
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| Protein GI | 88602529 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02090] isopropylmalate/citramalate/homocitrate synthases
[TIGR02660] homocitrate synthase NifV |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0516378 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGATTGTTT TATTGCGCGA TAAAAAGTTT CGATTCCTGG ATACAACGCT TCGTGACGGT
GAACAGACTC CTGGCGTCTC TCTCTCTCCT GCAGATAAAG TTGAGATAGC CACGGCATTA
TCGGATATCG GAGTTCACGT CATTGAAGCA GGGTCTGCGG TTGCATCAGA GGGAGAACGG
GAAGCCATCC GCCTTATCGC ACAGGCAGGT CTGTCTGCTG AATGCTGCAC CTATGTCCGG
GCTTTACCAC AGGATATTGA TTGTGCTGCA GATGCAGGGG CAGATTCAGT TCACCTGGTA
GTGCCGGTTT CAGATCTGCA TATTGAGCGG AAGATGCAGA AGACACGGGA GCAGGTCTTT
TCGATGGCGA TGAATGCTGT TGAATATGCC AAAGAGCGTG GTCTTATTGT GGAACTCTCC
GGTGAAGATG CATCCCGGGC GGATATGGAG TTTCTCAGAT CCCTGTATGC AGCAGGCATT
GAGCATGGAG CTGACCGGCT TTGTTTTTGT GATACGGTCG GGGTGCTGAC ACCTGAGGCT
ACCGCGGAGA TCATTCCGCC ACTCTGTCTT GCACCACTGA GTATCCATTG TCATAATGAC
CTTGGTCTGG CCCTTGCAAA CACACTTGCC GCACTCAAGG CCGGGGCAAG CTGCTGTCAT
GTGACCGTAA ATGGTCTTGG TGAACGGGCG GGGAATACTC CCCTTGAAGA GGTGGTCATG
GCACTAGAGC ATTTGTACAA GGTTGATACG GGAATTGAAA CCCGGAAGAT ATACCCCTTG
TCAACTCTGG TATCACGGCT GACCGGAGTC CCGTTTGCAA CCAACAAACC GATCGTCGGT
ACAATGGCGT TTACCCATGA GAGTGGTATT CATGCTCATG GGCTCTTCCG TGATTCAAGG
ACATATGAAC CGATAGCACC AGAACTTGTC GGAAGAACCC GGCGGATTGT TCTGGGTAAG
CATTCTGGTT CAGCTTCGGT AAAGGCGGCC CTGACTGAAC TTGGGTACTC ACCAAATCCA
CGACAACTTG AGGAGATGGT AAAGCGTATC AAGGCGCTTG GAGATGAAGG GAGAAGAGTC
ACCGATACTG ATGTTATGGC AATTGCTGAT GCTGTCATGC TTCTTGAATG CAGGCCGGTC
ATCTCGCTCA AGCAGTATAC CGTGGTTTCA GGGACGAATG TAATTCCGAC AGCCTCTGTT
ACGATGCAGG TGAACGGAAA GGAAGTGACT GGTGCAGCAA CCGGTGACGG ACCGGTGGAT
GCAGCATTGC GGGTATTGCA GCAGTCAGTA GCTGTAGCCG GGGATATCAG ACTTGAAGAG
TATCATGTCG ATGCGGTCAC CGGTGGAACA GATGCAATGG TAGAAGTTAC CGTAAAACTG
AGAAAAGATG GACAAACCAT AACATCACGC GGAGCCAGAA CCGACATTAT TCAGGCCAGC
GTGGAGGCGG TCATCACCGG GATGAACCGT CTGCTGAGGG AATATCATGA AAAGCGGAGC
ACAAATACTG ATTGA
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| Protein sequence | MIVLLRDKKF RFLDTTLRDG EQTPGVSLSP ADKVEIATAL SDIGVHVIEA GSAVASEGER
EAIRLIAQAG LSAECCTYVR ALPQDIDCAA DAGADSVHLV VPVSDLHIER KMQKTREQVF
SMAMNAVEYA KERGLIVELS GEDASRADME FLRSLYAAGI EHGADRLCFC DTVGVLTPEA
TAEIIPPLCL APLSIHCHND LGLALANTLA ALKAGASCCH VTVNGLGERA GNTPLEEVVM
ALEHLYKVDT GIETRKIYPL STLVSRLTGV PFATNKPIVG TMAFTHESGI HAHGLFRDSR
TYEPIAPELV GRTRRIVLGK HSGSASVKAA LTELGYSPNP RQLEEMVKRI KALGDEGRRV
TDTDVMAIAD AVMLLECRPV ISLKQYTVVS GTNVIPTASV TMQVNGKEVT GAATGDGPVD
AALRVLQQSV AVAGDIRLEE YHVDAVTGGT DAMVEVTVKL RKDGQTITSR GARTDIIQAS
VEAVITGMNR LLREYHEKRS TNTD
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