| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1077 |
|---|
| Symbol | |
|---|
| ID | 3925050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 1213815 |
|---|
| End bp | 1215860 |
|---|
| Gene Length | 2046 bp |
|---|
| Protein Length | 681 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637896716 |
|---|
| Product | putative ATP-dependent Lon protease |
|---|
| Protein accession | YP_502545 |
|---|
| Protein GI | 88602367 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4930] Predicted ATP-dependent Lon-type protease |
|---|
| TIGRFAM ID | [TIGR02653] conserved hypothetical protein
[TIGR02688] conserved hypothetical protein TIGR02688 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.543626 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAT TAGATAACCT GGACGAACAA GTAACCAAGA TATTTGATGG ATACGTTGTC
CGGAAAGATC TGGCACAGCA ATTCAGAGGA AGTTATCCGG TCCCTACCTA TGTAGCTGAA
TTCCTTATCG GACGATATTG CGCAACAACT GATGACGAAG AGATCAAAGA AGGACTTGAG
ATCGTTCAAA GACAACTTCA GGAACGGATA GTTCGGGCAG GTGAACAGGA GTTATTTAAA
GCCCGTGCCA GGGAGAAAGG ATCAGTCAAA ATAATAGATC TCGTTACCGC ACGGCTGGAT
ACGAAAACTG ATACTTTTGA AGCTAGTCTT CCCTCTTTGA TCCTTGATGA TGTATACATC
CCTGCGGAAA TGGTCTATGA TAATGAACGG ATGCTCACCG GGGGGTTTTA TGCTGAAGTC
GAGATCGAAT ATGGAAGCGG AATAGAGGGG AAAGGGGGCC GACCATTCTC TATCACAAAC
TTAAAACCGA TTCAACTCTC GAAAAGAAAT GTCCTTTCCG ATCTTGCTGA AGGTCGGAAG
CAGATGAGCA CCGAAGACTG GCGTTCATTT CTTATCAGAA GTATTGGACT TGAACCAGAA
ACCCTCTCAA AAAGAGCACA GGATGTTATT TTCCTCCGGA TGATCCCCTA TGTAGAAAAG
AACTACAATT GTGTTGAACT AGGTCCAAGA GGAACGGGTA AAAGTTACAT CTACCAGGAA
ATCAGTCCAT ATTCACATCT CGTTAGTGGA GGAAAAGCAA CCGTTGCAAA GATGTTCGTC
AATAATGCAA CGGGCCAGAG AGGACTTGTC TGTCAATATG ATCTTGTTTG TTTTGATGAA
GTAGCGGGAA TAAAATTTGA CACGAAAGAG GGGGTCAATA TCATGAAAGG CTATATGGCC
TCCGGTCAAT TCAGCCGTGG AAGAGAAAAT ATCCGGGCTG AGGGGGGGCT TGTAATGGTG
GGAAATTTCG ATGTCGATGT TGAACATCAA CAACGGATCG GTCATCTTTT TGGCCCCCTC
CCTCCGGAGA TGAGAGATGA TACTGCTTTC ATGGACCGGA TTCACAGTTA CATACCAGGA
TGGGATTTCC CGAAATATCA CCCGACACAA CTTACCACTC ATTTCGGTCT TGTATCTGAT
TTCCTGTCTG AATGCTTTAG ACAACTCAGA AATGATTCCC GCTTACCGAA GATAATGGAT
CGGGTATCAT TTGGGGATGC TCTATCAGGA AGAGACCGGA CAGGTGTCTT AAAAACCCTT
GATGGATTAC TAAAACTTCT ATATCCTGCT CATGACTCGG ATATTTCGGA TGAAGATCTT
GAATGGGCTG TCCGCCTTGC TCTTGAATGT AGAAGAAGAG TAAAGGAACA ACAAAAACGG
ATCGGTTCCG CAGAATTCCG AAATACTATG TTTAGTTACC GGCTCGGAAT AGAAGGGATT
GAGCAATATG TATCAACACC AGAACTCCAT CGCGAGAATA CAATTTCACC TGAGCCTCTC
CCTCCCGGCC AAGTCTGGGC TTTAGGTCCT GGAGAAGGAA ATGAAGGGAA CGGACTTTAT
AAACTCGAGA TTACTGTTAC TCCCGGATCT TCTATCCGGC TGATAAATGT AAAAGCTGCT
GCTGGACTTC GGGAAAGTTT AAGATCTGCT GAACAAGTTC TCTATACTCG TGCAAAATCT
CTTGTCGGGG ATCATGATCC TACTTCTGTT GAATTCTCAG TTCAGGTCCG GGCAATGACC
CCGGTCAGTG GAGGATCTTC ATTGTCTGTT CCTATATTAA TCGCCCTTTG TTCTGCTGCT
CTTAATAAAA GCACAAAAGG AGGATATGTT ATTGCTGGAG GAATGAGTGT TGGTGGAACT
CTTGAGCCGG TTTACAATGC ACTTGATATG GCTGAACTTG CAGCAGAAAA AGGGGCTTTA
GCAATAGTTC TCCCGGTTTC CTGCAGAAAA CAGATGAACG AAATGTCTGA TGAACTCGCT
GCCAGATTGG TTGTATTGTA TTATACAGAA CCAAGGGATG CATTGCTGAA GATGCTGGAT
GAGTAA
|
|---|
| Protein sequence | MAELDNLDEQ VTKIFDGYVV RKDLAQQFRG SYPVPTYVAE FLIGRYCATT DDEEIKEGLE
IVQRQLQERI VRAGEQELFK ARAREKGSVK IIDLVTARLD TKTDTFEASL PSLILDDVYI
PAEMVYDNER MLTGGFYAEV EIEYGSGIEG KGGRPFSITN LKPIQLSKRN VLSDLAEGRK
QMSTEDWRSF LIRSIGLEPE TLSKRAQDVI FLRMIPYVEK NYNCVELGPR GTGKSYIYQE
ISPYSHLVSG GKATVAKMFV NNATGQRGLV CQYDLVCFDE VAGIKFDTKE GVNIMKGYMA
SGQFSRGREN IRAEGGLVMV GNFDVDVEHQ QRIGHLFGPL PPEMRDDTAF MDRIHSYIPG
WDFPKYHPTQ LTTHFGLVSD FLSECFRQLR NDSRLPKIMD RVSFGDALSG RDRTGVLKTL
DGLLKLLYPA HDSDISDEDL EWAVRLALEC RRRVKEQQKR IGSAEFRNTM FSYRLGIEGI
EQYVSTPELH RENTISPEPL PPGQVWALGP GEGNEGNGLY KLEITVTPGS SIRLINVKAA
AGLRESLRSA EQVLYTRAKS LVGDHDPTSV EFSVQVRAMT PVSGGSSLSV PILIALCSAA
LNKSTKGGYV IAGGMSVGGT LEPVYNALDM AELAAEKGAL AIVLPVSCRK QMNEMSDELA
ARLVVLYYTE PRDALLKMLD E
|
|---|
| |