| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1033 |
|---|
| Symbol | |
|---|
| ID | 3924641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 1164531 |
|---|
| End bp | 1165355 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637896671 |
|---|
| Product | prephenate dehydrogenase |
|---|
| Protein accession | YP_502502 |
|---|
| Protein GI | 88602324 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0287] Prephenate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.393372 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.590632 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTG GCATCATTGG CGGGACCGGG GGCATGGGAA ATCTGTTTTC ACAGGTTTTT
CGCAACGCCG GTCACGAAGT ACTCATAGCC GGACGGAATA CTCCCCTAAA GAAAGAGGAT
ATTGCCCGCC TGGCTGATGT CATAGTAATT TCTGTTCCGA TCAGAGACAC GGTCTCTGTC
ATTTATGAGA TAGCCCCCCT CCTTGGTGAA CATCAGATCC TGGCAGATCT GACTTCATTA
AAGATTGATC CGGTCAATGC TATGATGTGT TCGAAAGCCA GGGTTATCGG ACTTCATCCG
ATGTTTGGCC CGACTGTCGG GACCATCCAG GGACAGACGA TAGTTGCTAC CCCCGCCCGA
TGTCATGAGA ATGATTTGAG TTTTTTTCAG AAGATTTTTG AAAGCCAGGG TGCCCGGGTT
ACGATAACGA CAGCTGAAGA GCATGACAGG ATGATGGCAG TGATTCAGGG GCTGACTCAT
TTTAAGGCAA TATTGCTAGC CGGGACCATG AGGAGGCTTG GGATATCCCC GGCAGATACT
GAATCATATA TGAGTCCGGT GTACCGGATC GAAACCGGAA TCGCAGGAAG ATTACTTGCT
CAAAATCCAG ACCTTTACGC TGATATCCTC TGTATGAATC CTCAGGTTCC TTCAGTTCTG
GATACCTGTA AGCAGGCGTT TGATGAGATG TTATGTATAA TTCAAGAAGG AGATCGGAAT
GCATTTACCG GAGAATTTCT TGCATCCCGC GAATGGTACG GATCATTCTG CGACCAGGCA
CAAAAGGAGA CTGACCTCCT TATTCAGGCG ATGGTGAGCA GGTGA
|
|---|
| Protein sequence | MKIGIIGGTG GMGNLFSQVF RNAGHEVLIA GRNTPLKKED IARLADVIVI SVPIRDTVSV
IYEIAPLLGE HQILADLTSL KIDPVNAMMC SKARVIGLHP MFGPTVGTIQ GQTIVATPAR
CHENDLSFFQ KIFESQGARV TITTAEEHDR MMAVIQGLTH FKAILLAGTM RRLGISPADT
ESYMSPVYRI ETGIAGRLLA QNPDLYADIL CMNPQVPSVL DTCKQAFDEM LCIIQEGDRN
AFTGEFLASR EWYGSFCDQA QKETDLLIQA MVSR
|
|---|
| |