Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_1003 |
Symbol | |
ID | 3924563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | - |
Start bp | 1130675 |
End bp | 1132060 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637896641 |
Product | hypothetical protein |
Protein accession | YP_502472 |
Protein GI | 88602294 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00542972 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGTTAAAGG AAGAATGGCG GATTCATTCG ACTATGTTCG GGAGTCTTAA TTTTGCCCTC TTTCCAGTTA TGATATGTGC CATTGCGTTC ATGGGTACAT TTCTTTTTCC CCTGATCCAA ACGACAATGC CGATTGGCGA TCTTGTCATC CTGATACATG CACAATATCT GATGCTGGGA TTCATGGTTG GAGCATTCGG CCTTCTTGGG AATGAAGTAA TGAACCGCCG GTTTGGTCAG GCCAGCCTTC TTGCATTCTC TGCCCGGACC CTGCCTCTCA GCCCCCGGTA TATCTTCACT ATTTTTGTGC TTAAGGATAC CTTGTATTAT TTTTTCCTCT GGATCTTTCC CCTGGGTGCC GGTTTTCTTG CGGGATCACT CTTCACCGGA ATTCCGGTTT TTTATCCGTT GAATATCCTT CTAACGCTGA CTCTCTCATT TCTCACCGGT ATGTCTGTTG TTTTTTTCCT GTCATCACTG TACGGGCGAT CAGTAAGGGC CCTCTTTCTC TTTCTGATTT TAGCAGGTTT TGTATTTCTT GGATGGTTCA TGTTCACCGG AACAAACCCG ACAACACTTT TTCCACCGCT TATACTCTTT TACCAATTTT CCTGGCATCT TCTTCTTGGA AGCGTTATGT TGGTTCTGGT TCCCTGTTGT ATTGCTCTTC TCCTGTTTTC ACCTGATATT CAATCCGGTA CAAAAAATTA CCCGAACCGG ATGAAACCCC TCATTCGTCA TCTCAACCGA TTTCCAAATC CGCCCCTTGC TGCAAAAGAT GTAATAGATC TCTGGCGGTC CGGGAGTATT GTTGGTCAGA CTATCTTTTC ATTTCTGGTA CCGCTTATCA CCATCTGGTT CTTTCTCTCC CTGCTTGATG AGTATGTTTC TACTATTCAT CTTCTTCTCA CCTTTGCGAT GATTACCGGA ATTATCGCGT CAACCATGTA CACCTGGCTG TGTATGTTTG ATTCATTCAG TATCTACGCT CTTCTTCCGC TTCATGTCAG AGATGTTATT ACCAGTAAAA TTACCTCCTT TACACTCCTT CAGGTGATCC CGATCTTCTT TATGGCAGTG ATTACTTTTC TTTCCGGTCA GGGAGAATTC CTGCTCCCGG TTCTGGTATT GACCTTATCG GTGTCGTATT ATGTCCTAGC GGTATCTATC TGGCTGACTG GATTATCTCC CAATGTTCTG GTGTATAATG GCCGGGTGAT GGTTCAGTAT TTTCTGCTTA TCGGCATTGC GTTATCGATA TTTGGTTCAT TGACTGTGAT GAATCCCTGG TTTGGTCTGG CTGGAGTTGG GCTGTTTATC CCAGCTTTTG TGCTGGTACG ATTAGGGATG AGGAAATGGG ACCGGGAGGA GGTGGTTGTG TATTAA
|
Protein sequence | MLKEEWRIHS TMFGSLNFAL FPVMICAIAF MGTFLFPLIQ TTMPIGDLVI LIHAQYLMLG FMVGAFGLLG NEVMNRRFGQ ASLLAFSART LPLSPRYIFT IFVLKDTLYY FFLWIFPLGA GFLAGSLFTG IPVFYPLNIL LTLTLSFLTG MSVVFFLSSL YGRSVRALFL FLILAGFVFL GWFMFTGTNP TTLFPPLILF YQFSWHLLLG SVMLVLVPCC IALLLFSPDI QSGTKNYPNR MKPLIRHLNR FPNPPLAAKD VIDLWRSGSI VGQTIFSFLV PLITIWFFLS LLDEYVSTIH LLLTFAMITG IIASTMYTWL CMFDSFSIYA LLPLHVRDVI TSKITSFTLL QVIPIFFMAV ITFLSGQGEF LLPVLVLTLS VSYYVLAVSI WLTGLSPNVL VYNGRVMVQY FLLIGIALSI FGSLTVMNPW FGLAGVGLFI PAFVLVRLGM RKWDREEVVV Y
|
| |