Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_0995 |
Symbol | |
ID | 3924042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | - |
Start bp | 1118609 |
End bp | 1120453 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637896632 |
Product | tetratricopeptide TPR_2 |
Protein accession | YP_502464 |
Protein GI | 88602286 |
COG category | [R] General function prediction only [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.129848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.103443 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACACGA ATGAAAAAGA ACTGATAATG CAGAGAGCCG CTTATCATGC AAAATGTGAA GAATTTGATA TGGCTCTCTC ATGCATTCAG ATGATTATCG ATGAAGATCC CGAGGACTCT GTTGCGTGGT ATAATAAAGG GTACACTCTC CATCTGTCTG GAAAATTTGA TGAAGCCAGA GACCTGTTTT TAAATCTCCA TTCCCGGTTC CCGGAGAAAG CTGATGTCTG CTTTGAGATT GGACGAATTG CACTCAAGAG AGGAGATCTC AGTGAAGCAG AAGAATACTT TACCAAGTGC ATTGCATTAG AACCTCTCCG ACCGGAACCC AGAATTGAAC TTGGAAAGAT GTGGTATGAC TCGGGGTATT ATCATAAATC TGCAGATTCA TTTACTGAGG CACTGGTTTT TGATCCTGAT AACCCGGAAA TCCGGACCTA TCTGGGTTTG ATATCTCATA AACTTGATAA ACCTGAAGAG GCCGAACGAT GGTTTCGCGA ATCCCTCGAC TATGATCCTG ATAATACAGA AACTTTGTTT TATTGTGCCA GGCTCTATGA GGAGATGGGT CGATGGGAGG ATGAACTCTG GTGTTATAAC CGGCTCATAG AAATTGACCC TGAACAGGTC ATCCCCTGGC TAAAAAAAGG GATGCTTTAT CTTTCACGGG ATGATCTTTC CATGGCAGTA TCATTTTTCC GGATGGCTTC CCGGCTTGAT GCAGACAGCC ACCTCCCTCA TCTGCTCCTC GGTCTTGTAT ACAGTACTCT GGACCGCCAT GAAGAAGCAA TTGCATCCCT TGAGAAAGCA GTATTATTGT CGGATGAACC AGATATTCTG CTCCAGTATG GCCGGGTCCT TGGGGCATGT AACCGGTACG AGGATGCTTT GGATGTTTTT GATTCAGTTC TGATGCAGCG TCCCGGCGAT CCAAACGCTG CCGAAGGATA TGCACGATCT TTATACCATC TACAACGATG GGATGATCTG GTGTCATTCT GTGAAAAAGA GAGAGGAGAA GATCCGGATA ATTCCTTCTG GATAACAACC CTTGCCCGCG TATGGGGCTG GCATCTTTCA GAGGTTGATA AGGCTGTTAC AATTCTGTAT AAATGGCTGG ATCAGTATAA TGGAACTCAG ATCTCACTCG TACTTGCCGA TCTGCTGGTG CATTCAGAAC AGTTTGAAGA GGCCAGAACT TTATTGTCTG CTCTACTTGA AAATAAACCA GAAGATTATC AGATTTTGTT TCGGTATGCC TCATTACTTG CCCAGATTAA GGAATTTGAA AAGGCTGCGG AGCAGTTTGA ACTGCTCTTA CATCAAAGAC CTGCTGACGG GCATCTGGCA TACCTTGCAG GTCAGGCCTG TGAACAGTCA GGGGATCCAG ACCGGGCGCT CGAATTTTTC ACCCGGGCGG TTACCAGTAT ACCTGATAGT GCTGAGATCT GGCTTTCCCG TGCACGGGTA TTATTTGAAC TCGGGCAATT TGCTGAATCT GCAGTAAATG CTGCACAGGC AGCCTCTTTG AATCCTGACT GGTCTGATGC ATTTCTTCTA AAGGGGATGT CAGAGATCCA TGCGGAAGAG TATGATAAAG CCCGGATAAG TCTGACCTGT GTCACCACTC TGGACCCTGA AAATCCGGAT GGCTGGAGAA ATTTAGGGGA TGTCCTGCTT CTGGCGGGTG AAGAGGCAGC AGCACGTATC TGCTATGAAC GGACACTTAC CCTAGATCCG GAAGATCTCA GAGCACAGGA TGGGTATAAA GTATGCACAG ATATTCTCAT CGGCAGGTCT TCTTCAGATC AATCTGAAGA ACCTATATCG GATGAACATC AGTAA
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Protein sequence | MHTNEKELIM QRAAYHAKCE EFDMALSCIQ MIIDEDPEDS VAWYNKGYTL HLSGKFDEAR DLFLNLHSRF PEKADVCFEI GRIALKRGDL SEAEEYFTKC IALEPLRPEP RIELGKMWYD SGYYHKSADS FTEALVFDPD NPEIRTYLGL ISHKLDKPEE AERWFRESLD YDPDNTETLF YCARLYEEMG RWEDELWCYN RLIEIDPEQV IPWLKKGMLY LSRDDLSMAV SFFRMASRLD ADSHLPHLLL GLVYSTLDRH EEAIASLEKA VLLSDEPDIL LQYGRVLGAC NRYEDALDVF DSVLMQRPGD PNAAEGYARS LYHLQRWDDL VSFCEKERGE DPDNSFWITT LARVWGWHLS EVDKAVTILY KWLDQYNGTQ ISLVLADLLV HSEQFEEART LLSALLENKP EDYQILFRYA SLLAQIKEFE KAAEQFELLL HQRPADGHLA YLAGQACEQS GDPDRALEFF TRAVTSIPDS AEIWLSRARV LFELGQFAES AVNAAQAASL NPDWSDAFLL KGMSEIHAEE YDKARISLTC VTTLDPENPD GWRNLGDVLL LAGEEAAARI CYERTLTLDP EDLRAQDGYK VCTDILIGRS SSDQSEEPIS DEHQ
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