| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0949 |
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| Symbol | |
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| ID | 3923231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | + |
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| Start bp | 1053564 |
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| End bp | 1056929 |
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| Gene Length | 3366 bp |
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| Protein Length | 1121 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637896585 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_502418 |
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| Protein GI | 88602240 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat
[COG3420] Nitrous oxidase accessory protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0849269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0980091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAA ATGTGAAAAA AAAATCTAAT AATAACAAAA TTTTTGCAGG TATTTTTTTT
GTTTTATTCT TTTCTCTCTT ATGCAACTTG GTAACAGCTG CTGGATCGGC CCATACAGAA
GGCGATTATG TATTGAAAAC GGATCAACTG AGAAATCTGA CGAATGCTGA TGGAGCTGGA
GTAATTGTCG GTGTAGTATC GAGTGGAGTA AAAGGTTTAG CAGATGCTCA AAGATCAGGT
GACTTACCCG ATAGCCTCGT AATATTAAAA GAAGGCAAAA AAGCTGAAGG AACTGCAATG
ATGGAGATTA TCCACGATAT TGCTCCCGGA GCCACTCTTC TCTATCATGA TTTTGGAGGA
GGGAGAGAAG AGAAATTTAT TGAAGCTTTT CAAAACCTCA TAAATGCCGG CGCAACAATC
ATTGTAGAAG ATGTGTTTAA TTATGAAGTC CCGTATTTTG AAGATGGAAC AATAGCACAG
GAAATATCCA AAATTATAGA TGAAAATCCT GATCTCCTGA TTATTAGTTC AGCTGGGAAT
ACTGCCAATA ACCATTATCA GGCAGTTTTC TCTGATGGTG GTGAAGGATA TCATTCATTT
AATGGCTCCA CCGGAATTCC TCTTGAAATT CAGCCTGGTG GGAGAGTGAA ACTCCATTTA
CAATGGGATG ATCCCTATAC GGCAGCATCA AATGACTTTG ATCTCTTCAT TCATGATCTG
CAGAGCGACT CAGATGTTGC TATCGGAAAT AAGGTGCAGA CCGGAGAAGA GAAACCCTAC
GAAAAAATCG ATTATCAGAA TGTTGGAGAT AAAGTTCAAA AAGCCGAGGT TCGGATCCGG
GCAAAAGAAG GCAAAGGACA GGGATCACAC CTTGAACTCT TACTCGAAAC TGATGCTACA
CGAGTTGTAG TCGGAAAAGA ATATCTGACT CCTAATGATT CAATCATCGG TTGGGCGGCT
CTTCCCAATG TGATTTCAGT TGCTGCCCTT TCCGCAGAAA ATCAGAAAAT TCAGGATTTT
TCATCTCAGG GTACTGTCAC AATTGCCTAT CCGGTCCCTG ATGTCAGGGA AAAACCAGAA
ATTACAGGTG TTGACGGAGT CAGTGTTACA GGGGCTGGTG ATTTTCCAAC ACCATTCACA
GGCACAAGCG CTGCTGCACC GCACATTGCA GGATTGCTTG CATTAGTAAA AAGTCTGTAT
CCGACAGTCC CAAATACTGA ACTGCGTGAT GCACTCCTGA ATAGTGCCAC CGATTTGGGA
ACCCCCGGAT GGGATGCCAT TTATGGATAT GGCCTTGCTG ATGCTCTCTC ACTTCATGCC
TATCTTCAGG AAGCAGGAAG GACCCCTGAA GTACCAGGCA CAAATCAGAC ACCAGTAATT
CCTGATATCA TTATACCTTC TGAACAACTT CCTCCAAACG AATTTATCCT CACTGAACCG
GCCGTTCTCT CAAAACCCGG ATCATATATC CTGGGTGATG ACATCATCGA CTTTTCTGAA
ACCATTCTGA CAATTACCGG TTCAGATATT AATATTGATG GAAATGGTCA CTCAATATCA
GGCATATCAA TCCGGTTTGG AACCGAAGCT CCGGTCTTAC AAACAGGGAT ACTCATTTGG
TCTCCTGAAA ACAAACCGGT TTCAAATATT TCAATCAGAA ATCTGAATGT TACCGGAACA
TATGCAGGAA TTTCAGCGAA AGGAGTTCAA AACCTTCTTA TTGACTCATG TGGTCTACTC
TATAATAACA GAGGGATTGA TCTTTCAAAT ACCAGGAATA TCCGGATACA AAAATCTGTC
ACCATAGGAA ATGGATATGC CGGAATTCAT GCAGATGCCA GTTCTACTGA TCTATCTATT
GAAGATAACC AGATTACTAA GAATCTATAT GGTATCGTAC TGGATGGTTC ATCCCTTTCC
ATGGTGAACA AAAATCTGGT AACTGATAAT TATTATGATG GCATTAAACT GGATCATGGC
GTGAATCTTG TTCAGGTTGA TAATAATTTC TGTGCAGGAA ATAAGAATGG AGGAATCACC
CTATTATCCG GACATAAAAA CGCTATCACA AATAATACCT GTCAGATGAA TAATCCGTCT
GGCATTTTGC TTTCAGAATG TTCTGAAAAC ACTATTTCCG GAAACCGTCT GGTACGAAAT
GTCAGAGGAT TGAATGCATA CTATTCAGAC AATAATATTA TAACCTATAA TGAAATCGTC
GGAAATGATG CAACGGGCAT CATGCTCCAA CCTTCAGGCC ATAACAGCAT TTCAGATAAC
CGGATTATTG CGAATTTTGC AGAAGGGATT CTGATTACCA ATGCAGTGGG TTCAGATCAG
ATCAACCGGA TTGTAAACAA CTATCTTGAA AACTTCCAGA ATGTTCGCAT CCAGGAGGGA
GGAAGACCCA ATTATCAATG GAATGATCCT ATGACAACAG CGACGAACAT TATCGGAGGT
CCGGTAAAAG GCGGTAATGT CTGGTCTCTA CCAGATGGGA AAGGATATTC CCAGACTTGT
CAGGACAAAA ATGCGGATGG TATATGCGAT CTTCCCTTTA CGGTCTTTTC TGGAAATATT
GATGGACTGC CCTTGAAGTA TACCGGTGAG TCTTTGTCCC CGGCTGTCCT TTCAGAACTG
GGCCCTCTTC CTGAACCAAA AACTGCTGAA GATTTTGTAA CTAGAGGGAA AATCCTGATG
GGCAGTAGCG ATTATACGGG AGCCATTGCT GCATATGAAC AGGCAATTGC ACTTTCCCCG
ACTAACTATC AGGCCTGGCG GGATAAGGCT CTCTGTCTGA AGGAACTCAA ACAGTATGAT
GAAGCGATGC AGGCTTTGAA TACCATCCTA CCCATTTATA AAGAAAAACC GGAACTCTGG
TCTACTGCAG GAGATATCCT TTTAGTGGAT ATGCAAAAAT ATGCTGAATC GATTCCATTT
TTTGAAAAAG CCATATCACT GGACAGCGAG GATACTCATT CACTAATTAA CCTGGCATTT
GCCTATGATA AAACAGGAAA TCCGGACCGT GCATTAGAAC TATACCGTCA GGCATTAGAC
ATTAACCCCT CACTCACTGA TGCATGGAAT AAAGCAGGCA ATATTCTCAC TCGCGCAGGA
CAATTTGAGG ATGCTGTGAG AATGTACGAC AAAGGGCTTT CCATTGACCC GGGAAATGCA
TTTATTCTTA ACAATAAGGG TTATTCGTTA TTTTTAGCTG GAAAATACCC TGAAGCTATA
GAATCCCTTG AGAAAGCTGT TATCTTAGAT CCCAAATATA AATCAGCCTG GAAAAATTTG
GGGGACGTAT TCAAAGCTAT GGGCAATATA GCCGAATCAG AACGAGCATA TGCTAATGCT
GCCTGA
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| Protein sequence | MTKNVKKKSN NNKIFAGIFF VLFFSLLCNL VTAAGSAHTE GDYVLKTDQL RNLTNADGAG
VIVGVVSSGV KGLADAQRSG DLPDSLVILK EGKKAEGTAM MEIIHDIAPG ATLLYHDFGG
GREEKFIEAF QNLINAGATI IVEDVFNYEV PYFEDGTIAQ EISKIIDENP DLLIISSAGN
TANNHYQAVF SDGGEGYHSF NGSTGIPLEI QPGGRVKLHL QWDDPYTAAS NDFDLFIHDL
QSDSDVAIGN KVQTGEEKPY EKIDYQNVGD KVQKAEVRIR AKEGKGQGSH LELLLETDAT
RVVVGKEYLT PNDSIIGWAA LPNVISVAAL SAENQKIQDF SSQGTVTIAY PVPDVREKPE
ITGVDGVSVT GAGDFPTPFT GTSAAAPHIA GLLALVKSLY PTVPNTELRD ALLNSATDLG
TPGWDAIYGY GLADALSLHA YLQEAGRTPE VPGTNQTPVI PDIIIPSEQL PPNEFILTEP
AVLSKPGSYI LGDDIIDFSE TILTITGSDI NIDGNGHSIS GISIRFGTEA PVLQTGILIW
SPENKPVSNI SIRNLNVTGT YAGISAKGVQ NLLIDSCGLL YNNRGIDLSN TRNIRIQKSV
TIGNGYAGIH ADASSTDLSI EDNQITKNLY GIVLDGSSLS MVNKNLVTDN YYDGIKLDHG
VNLVQVDNNF CAGNKNGGIT LLSGHKNAIT NNTCQMNNPS GILLSECSEN TISGNRLVRN
VRGLNAYYSD NNIITYNEIV GNDATGIMLQ PSGHNSISDN RIIANFAEGI LITNAVGSDQ
INRIVNNYLE NFQNVRIQEG GRPNYQWNDP MTTATNIIGG PVKGGNVWSL PDGKGYSQTC
QDKNADGICD LPFTVFSGNI DGLPLKYTGE SLSPAVLSEL GPLPEPKTAE DFVTRGKILM
GSSDYTGAIA AYEQAIALSP TNYQAWRDKA LCLKELKQYD EAMQALNTIL PIYKEKPELW
STAGDILLVD MQKYAESIPF FEKAISLDSE DTHSLINLAF AYDKTGNPDR ALELYRQALD
INPSLTDAWN KAGNILTRAG QFEDAVRMYD KGLSIDPGNA FILNNKGYSL FLAGKYPEAI
ESLEKAVILD PKYKSAWKNL GDVFKAMGNI AESERAYANA A
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