Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_0564 |
Symbol | |
ID | 3923141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | - |
Start bp | 652297 |
End bp | 652995 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637896203 |
Product | hypothetical protein |
Protein accession | YP_502043 |
Protein GI | 88601865 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1468] RecB family exonuclease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.567175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGAAC CGTGCTATTC CAAAAATCCG GATAATGGTA TTGCAATATC ATCTCTTATC AGAGCATTTC ATTGTCCACG GCAGTATTTC TTTTACAAAG ATATCCCCTC AAAACCTGCG ATACAGTACA GTATTTGTAA ACTGGTCTCA TGCGCAGAGA AGGGTTCGAC CGAAGAGGAA CTCTGGTATA CTCTTCATAT GATACATCCA GAGATATCAG AAGATAAAAG GCATTTCCTC AGAGATTGTC TCATGGCAAT GGAACATGCT CCGGTCAGAC CCTGGACAGA GACTGATATT TCTGTCCGAT CAGAGAGAGC AGGAATTCAT GGGCTCCTTG ATAAATATCA TGCACAAAAT GGTGAATATA CCCTGACCCG GTGCACTATG GCTCCGAAAA CCGGGTGCTG GGCTGAGGAT GCAATCAGAA CTGCAGCCTT TCTGCTCTGC ATTGAAGAGG CCGGTGCTGT GAAAACACCA GGCATATATA TTGAATATGT CCGGTCAGGT ATTATCAGAT ATTATGAACC GACACCGAAA GACCGGAGAA GGGTACTCCA TCTGATTCAA CAGGTAAAAG AGATCGATAA TGGCGAGTTT CCCCACAAAC CTCTGAATCC TCCATGCTCA CGATGCAGGT TTTCGGACCG GTGTGCACAG AATGCACCAC GACGGCTATC CTTCCTGCTC AAGAAGTGA
|
Protein sequence | MTEPCYSKNP DNGIAISSLI RAFHCPRQYF FYKDIPSKPA IQYSICKLVS CAEKGSTEEE LWYTLHMIHP EISEDKRHFL RDCLMAMEHA PVRPWTETDI SVRSERAGIH GLLDKYHAQN GEYTLTRCTM APKTGCWAED AIRTAAFLLC IEEAGAVKTP GIYIEYVRSG IIRYYEPTPK DRRRVLHLIQ QVKEIDNGEF PHKPLNPPCS RCRFSDRCAQ NAPRRLSFLL KK
|
| |