| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0527 |
|---|
| Symbol | |
|---|
| ID | 3925026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 603982 |
|---|
| End bp | 605202 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637896166 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_502006 |
|---|
| Protein GI | 88601828 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1944] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00702] uncharacterized domain
[TIGR03266] putative methanogenesis marker protein 1
[TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.518429 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATACTCT CGTCCTGCAA AAAACTCTAC CAAAAGGAGA CTCATCGGAC CAGATCTCCA
GAAGAGACTT ATGAAGCAGT CCATGACCTC ACCGGGCCGG CCGGAATTAC CAGGGTTGCT
GATATCACCG GTCTTGACAG AATAGGCATC CCTGTTTTTT CCTGTATTCG TCCGGTTGCT
GCCGAAGGCG CCATAACGGT ATATAATGGG AAAGGAGCAA CCCCCATCGC TGCAAGAGTA
TCGGCAATTA TGGAAGGTCT TGAACGATAT TCAGCAGAGG TCCATGACCG CAGCCCGCAG
ACCATGACCT ATGACCAGAT TCGTATGGAG AAGAATGCAA TACGACCAGA TACTCTCATT
CTTCCCGAAT ATGCAGAACC GGAATGGCCT ATTCCCTGGT GGCAGGGATA TGATATCCTC
CGCAACGAAG AGGTTTGGGT TCCTGCACAT GCAGTCTTTC ATCCGGTACC CCGGATCATG
GGGAAGTTAT TCAGGACCAG TACAAACGGA ATCGCATCAG GCAATACCTA TGAAGAAGCA
GTCTTTCACA GCCTGTGTGA ACTTATAGAG CGGGACGCCT GGTCATTGGT AGAAGCATCA
CAGAATGCAG GTCCGGCGAT AACAGACGTG ACCCACCCGG TTGCCCGTGA ACTTCTTGAC
AAGTTTAAAG AGGCCGGGGT AGATGTAATT TTGCGCGATA TCACAAGTGA CCTTGGAATC
CCGACCGTCG CGGCAGTATC AGATGATCTC CAGCTTCGCG ATCCGACGCT CCTGTGCATC
GGAATGGGAT CACATCTCTG CAGTGAGATT GCAATTCTCA GAGCCCTTAC AGAAGTAGCC
CAGAGCAGGG CCACACAGAT CCATGGAGCA CGGGAAGATA CAAAAACAAC TCATTTCCTC
TCAAAAGTCG GATACGACCG CGCCAAGCGA TTGAATAAAA AATGGTTTAC CACCGAAGCG
GAAATCGCAT ACAAAGATAT GCCATCATAC CATACCGATG ACTTTCTGGA TGACATTCAC
ATCGTTCTTG ACCGCTTGAA AGCAGCAGGA CTTGACCGGG TGATCGTACA TGACCTGACC
AGACCGGAGA TTGGGGTGCC GGTTGTCAGA GTAATTGTGC CTGGACTTGA ACACTATGCA
ATGGATCCCG AACGTATCGG AGAACGGTGT AGACGTGCAC GACGTAATTA TATTCCTGGG
ACCAAGCCTG TCGATTCCTG A
|
|---|
| Protein sequence | MILSSCKKLY QKETHRTRSP EETYEAVHDL TGPAGITRVA DITGLDRIGI PVFSCIRPVA
AEGAITVYNG KGATPIAARV SAIMEGLERY SAEVHDRSPQ TMTYDQIRME KNAIRPDTLI
LPEYAEPEWP IPWWQGYDIL RNEEVWVPAH AVFHPVPRIM GKLFRTSTNG IASGNTYEEA
VFHSLCELIE RDAWSLVEAS QNAGPAITDV THPVARELLD KFKEAGVDVI LRDITSDLGI
PTVAAVSDDL QLRDPTLLCI GMGSHLCSEI AILRALTEVA QSRATQIHGA REDTKTTHFL
SKVGYDRAKR LNKKWFTTEA EIAYKDMPSY HTDDFLDDIH IVLDRLKAAG LDRVIVHDLT
RPEIGVPVVR VIVPGLEHYA MDPERIGERC RRARRNYIPG TKPVDS
|
|---|
| |