Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_0328 |
Symbol | |
ID | 3923695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 368729 |
End bp | 369706 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637895974 |
Product | inner-membrane translocator |
Protein accession | YP_501817 |
Protein GI | 88601639 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.286891 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.171553 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCCTC AGTTTCTCCA GGAGAGAAGA TATCAGTTCG CGGTGCTGGC ATTCATCGTG GCTATTCTTC TTCCGGTCAT TGTGGGATCA AACCAGTACT ACCGGACAGT CCTTATCCTG ATGCTGATTT TTATCATCTA TGCGTCGGCC TGGAATTTTC TTACTTTCTC AGGCCAGGGC TCGCTCGGTC ATGCTGCCTT TTTTGGGCTG GGCGGATATT TTTCATCTCT CATCGCTATT AACTCCGGTA TCCCGCTGAT TATCGCAGTT TTTGCAGGAG CATGTGTCAC AGCCGGAATT GGTGTTCTTA TCGGAATGAC CTGTGTAAGA CTCCGGGAAT GGTTCCTTGC CATGGTGACA TTCGGGTTTG CGGTCATCAT CCAGACCCTT ATTGTGATAA GTCAGCTGAG CCCCATCACC GGCGGATGGG ATGGGTTTGC AGTTCCAAAG CTTATCCCTT CATCAATTCC GGGGTCACCA AACCTTGAGT ACTATGGTAT CCTTGCAATC GCTGTCGGCT CCATTCTGGT CTTTCATCTG CTGCTCAAAT CAAAGATTGG ACTTGCACTT GCAGCAATCC GTGAGAATGA GATGGAAGCG AAGGCATCAG GGATAAACCC GGTCCCGTTC AAGCTCTTTG CGTTTGGGAT AAGTTCTTTT ATCACGGCAA TAGCAGGGGC CCTTGAGGTA TGTCATTTCG GATACATCTC TCCTGAGATA TTCGGGACTG ATATCTCTTT CTGGCCGATT ATCTATTCAA TAACCGGCGG GCTTGGAACA CTTGCAGGGC CGATCATCGG AACTATTGTT ATCAGTCTTC TCTGGGAAGG ACTAAATGCT CTCGGCTTTA CGTATGAGCG GTTTATTGTG ATTGGGATTC TGCTCATCCT GACGATCATA TTCCTGCCAA AGGGTCTGGT CAGTCTTCCG GAACGATTAC AATATTTAAA AAGGATAAAA ACGGGAGATG AAAAGTGA
|
Protein sequence | MIPQFLQERR YQFAVLAFIV AILLPVIVGS NQYYRTVLIL MLIFIIYASA WNFLTFSGQG SLGHAAFFGL GGYFSSLIAI NSGIPLIIAV FAGACVTAGI GVLIGMTCVR LREWFLAMVT FGFAVIIQTL IVISQLSPIT GGWDGFAVPK LIPSSIPGSP NLEYYGILAI AVGSILVFHL LLKSKIGLAL AAIRENEMEA KASGINPVPF KLFAFGISSF ITAIAGALEV CHFGYISPEI FGTDISFWPI IYSITGGLGT LAGPIIGTIV ISLLWEGLNA LGFTYERFIV IGILLILTII FLPKGLVSLP ERLQYLKRIK TGDEK
|
| |