| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0306 |
|---|
| Symbol | |
|---|
| ID | 3924324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 344480 |
|---|
| End bp | 346060 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637895952 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_501795 |
|---|
| Protein GI | 88601617 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.203895 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTTT TCAATACTGC CGGGCCTGTA CAGTGTGAGA AACATTACTG TCTTCCTCCT
CTTTCCCGGT TTGATCTACC AGAAATACTC AATCTCATCA ATCAGGAGAA GTATTTTGTT
CTGCATGCAC CAAGGCAGAG TGGAAAGACT TCATGTCTAC TGGCTTTGCG GGAATATTTG
AACCGTGATG GGAAATTTGC TACATTCTAT ATGAATGTGG AAACCGGACA GACTGCAAGA
AGTGATGTTG GGAGAGGAAT GAAAGCAATA ATCAGCGAAC TTGCATTTCA GACTGATTTA
ACGATAGAGG ACGCATCACT AAGGGATCAG ATAAATCATT ATATTGATGT ATATGGTCCT
GATGCAGCAT TTAAAATGGT TTTATCAGAT ATATGCAAAA AGATCTCTCT TCCGGTCGTT
GTTCTTATTG ATGAGATTGA TGCCCTGGTT GGTGACACTC TTATTTCAGT TCTTCGGCAA
CTTCGATCTG GTTACACTGA AAGACCTGCG TCGTTCCCAT CATCAATCAT CCTCTGTGGT
GTTCGTGACG TCCGTGACTA CCGGATTCAT TCAGATAAAG ATAAGGCAAT AATCACCGGT
GGAAGTGCAT TTAATGTCAA AGCCGAATCC TTACGGCTTG GAAATTTTAC TGAAGAAGAA
ACCAGAACTC TGCTTCTTGA ACATACCAAA GAGACCGGGC AGATATTTGA AGAAGAAGCC
CTATCCTCTG TCTGGAACCT GACACAGGGT CAGCCCTGGC TGGTTAATGC TCTTGCATAT
GAGATCTGTT TCAAAATAGA AGAGGGGAAG AACCGATCTA ATCCGGTACG TAAGTCCATG
GTTATGGAGG CAAAAGAACA TCTCATCCAG AGGAGGGAGA CTCACCTAGA CCAACTGGTG
GATAAATTAC AGGAAGAGCG TGTCCGGAGA GTTATTGAAC CTATATTATG TGGTGAATCC
GGACCTGAAA CGATTCCGGA AGATGACATC TGGTACACAG AGGATCTGGG AATTATTACA
ACCAAAGGCC AGCTTCGAAT CTCAAATCCT ATATATCAGG AGATAATACC CAGAATTCTC
ACATACTCAA CCCAGCTTAC TATTACAAAA AAACCTGCAT GGTATATTGA TTCCAGGGGC
AGACTGGAGA TGAAAAAACT TCTTCAGGAG TTTCAGCAGT TTTTCCGGGA GCACAGTGAA
TCCTGGCTCG AAAGGTTCTC CTATCGAAAA GCCGGCCCTC AGTTACTCCT TCAGGCATTT
TTACAGCGGA TAATAAACGG AGGCGGACAG ATTACGCGGG AATATGGACT TGGCAGAGGT
AGGACCGATC TTTTTATCCT TTGGCATCTG CCTGACGATA CATTTCAGCG GTTTGTCATC
GAATGCAAGA TTGTGTATGG TTCACGGGAA GCAACGATTC AGAAAGGCCT TGACCAGGTG
ACCAGGTATG CTGACCGATT TGGAGCAGAA GAGGTATACC TGCTCATATA TGACCGGAAG
AAAGGAAAGA GCTGGGAGAA GAGGATCTTT ACTGATACGA TTGAACATGA AGGCAGACAG
GTAACGGTAT TTGGGATGTG A
|
|---|
| Protein sequence | MRFFNTAGPV QCEKHYCLPP LSRFDLPEIL NLINQEKYFV LHAPRQSGKT SCLLALREYL
NRDGKFATFY MNVETGQTAR SDVGRGMKAI ISELAFQTDL TIEDASLRDQ INHYIDVYGP
DAAFKMVLSD ICKKISLPVV VLIDEIDALV GDTLISVLRQ LRSGYTERPA SFPSSIILCG
VRDVRDYRIH SDKDKAIITG GSAFNVKAES LRLGNFTEEE TRTLLLEHTK ETGQIFEEEA
LSSVWNLTQG QPWLVNALAY EICFKIEEGK NRSNPVRKSM VMEAKEHLIQ RRETHLDQLV
DKLQEERVRR VIEPILCGES GPETIPEDDI WYTEDLGIIT TKGQLRISNP IYQEIIPRIL
TYSTQLTITK KPAWYIDSRG RLEMKKLLQE FQQFFREHSE SWLERFSYRK AGPQLLLQAF
LQRIINGGGQ ITREYGLGRG RTDLFILWHL PDDTFQRFVI ECKIVYGSRE ATIQKGLDQV
TRYADRFGAE EVYLLIYDRK KGKSWEKRIF TDTIEHEGRQ VTVFGM
|
|---|
| |