| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0248 |
|---|
| Symbol | |
|---|
| ID | 3925137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 273566 |
|---|
| End bp | 274693 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637895896 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_501739 |
|---|
| Protein GI | 88601561 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0774691 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.65467 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACC TGACAAAAAT TCTGGTTGCA ATCTTAATGC TGGTTTCTCT TGTATCTATA
CCAGCATGCA TGGCTACTGA TTCAAATGGA GCAGAGAGAA CAATTACCGA TGGATTTGGC
AGAACGGTCA CCATTCCAAC AGAGGTAAAA GAAGTTATCT GTTCAGGCTC CGGATGTCTC
CGGTATCTTA CCTACCTTGA TGGACAGGAT CTGATTGTGG GTGTTGATAG TATTGAGAAA
GAACCGCAGG CCATGGATGC TCGTGGATAT GCACTCCTCA ACCCACAGTT TAAGGATTAC
CCTTTATTCG GTGAATTCAG AGGAAAAGAT GATCCTGAAA AGGTAATTGC TCTAGCCCCC
CAGTTAATTT TTAAGACCGG AGCTTCAGGT CAGCCATCTG CAACAAATTC TGTCGAAGGG
GATAAATTAA CCGAAAAGAC GAATATCCCC GTTGTTATGT TTCCTTATGG GTCACTAAGA
ACGGCTGCTG AACAGGCCGA GATGTTTGGT GGACTTCGTT TAATGGGAGA AGTAATTGGT
AAAGAAGACC GTGCAAATGA ACTGATTGCT TACATTGAGG AGACCATTTC TGATCTTAAA
TCCAGAACTA AGGATATTCC GGAGTCTGAA CAAAAGACAG CATATGTCGG AGGTGTCAGT
TATTCAGGAG CTCATGGAAT TATTTCAACT GAACCGGCAT ATCCACCATT CCTATGGCTG
AATATCAAGA ATGTTGCAGG AAAAATGGGG ACTCAACATG CTGATGTTGC AAAAGAAGCA
ATTGTTGACT GGGATCCTGA ATTCCTGTTC ATGGATGTTG GAACGCTACA GATGGACAGC
GAAGGAGCAA TTGGAGAATT GAAGAATGAT CCGGCCCTTC AGGGATTAAC AGCAGTGAAA
GAAGGAAAGG TATACGGAGT TCTCCCATAC AATTTCTATA ACACGAATTA TGAGAATGTT
CTTGCAGATG CATACTACAT TGGAAAGATC GTCTATCCAG AGAAGTTTGC AGATATTGAT
CCTGAAGCAA AGGCAAATGA GATCATGACC AAATTCCTTG GTTCATCTCC ACTGGACAAA
ATTAACTCCC AGTATAAAAA CATGGGATTC TCTCAAATCT CTCTTTGA
|
|---|
| Protein sequence | MKNLTKILVA ILMLVSLVSI PACMATDSNG AERTITDGFG RTVTIPTEVK EVICSGSGCL
RYLTYLDGQD LIVGVDSIEK EPQAMDARGY ALLNPQFKDY PLFGEFRGKD DPEKVIALAP
QLIFKTGASG QPSATNSVEG DKLTEKTNIP VVMFPYGSLR TAAEQAEMFG GLRLMGEVIG
KEDRANELIA YIEETISDLK SRTKDIPESE QKTAYVGGVS YSGAHGIIST EPAYPPFLWL
NIKNVAGKMG TQHADVAKEA IVDWDPEFLF MDVGTLQMDS EGAIGELKND PALQGLTAVK
EGKVYGVLPY NFYNTNYENV LADAYYIGKI VYPEKFADID PEAKANEIMT KFLGSSPLDK
INSQYKNMGF SQISL
|
|---|
| |