| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0212 |
|---|
| Symbol | |
|---|
| ID | 3923868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 237686 |
|---|
| End bp | 238564 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637895860 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_501703 |
|---|
| Protein GI | 88601525 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000142566 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTACT TGGATAATTA TTTCAGTTCA TGTTATGAAT TATACCAGGA ATATAACAAT
AAAATTAGAA AAAAGCCATT ACTCTTAATT GGATTTACCA TCTTGGTTAT GATGTGTCTG
ATTGCAATTT TTGCTCCGAT TATTGCTCCT CATGATCCAA ATGATCAATC ATTAAAAGAC
CGGTTCAAGA GTCCCTGTCT TGAATATCCA CTTGGTACTG ATCAATTTGG AAGATGTATT
TTTAGTCGGA TTGTGTATGG ATCCCAGACT TCTCTTGCCG TAGCAGTGAT AACAACAATT
ATTGTTGTAT TTATCGGACT ATTGGTGGGG TTATATGCCG GATATTATCG AAAACTTGAC
GGTCTGTTGA TGAGGGTTAC TGATATTATG TTGGCATTTC CATCAATGGT AATTACTCTT
GCACTGGTTG GTATATTCGG ACCTAGTATT CCGACCATTA TTTCAGCTCT TGCAATTCCC
GGGTGGGCAA AATATGCCAG GGTTACCAGA TCCACAACCT TATCAATCAA AAACCGAGGG
TATGTTCAAA GTGCCAGGGC ACTTGGGGCG AAAGATAGAT ACATTATCTT TAAACATATT
CTTCCCAATT CTCTTGCCCC GATCATGGAA ATTGCAACAT TAGGGTTGGG AGGAAAAATT
ATTTCCATTG CAGGACTTGG GTTTTTAGGG CTTGGAATTC AACCTCCCAC ACCGGAGTGG
GGAACTATCA TGAATCAAGG TCTCCCGTAT TTAGGAAAGG CCCCCCTGAT TACTCTTTCT
GCTGGAGCGA TGATTCTGGT ATTTGTTCTC TCATCAAACC TTATCGGGAG TGAAATCCGG
GATGTTATGG ATCCAAAAAC AGATTCTATC ATCCTGTAA
|
|---|
| Protein sequence | MSYLDNYFSS CYELYQEYNN KIRKKPLLLI GFTILVMMCL IAIFAPIIAP HDPNDQSLKD
RFKSPCLEYP LGTDQFGRCI FSRIVYGSQT SLAVAVITTI IVVFIGLLVG LYAGYYRKLD
GLLMRVTDIM LAFPSMVITL ALVGIFGPSI PTIISALAIP GWAKYARVTR STTLSIKNRG
YVQSARALGA KDRYIIFKHI LPNSLAPIME IATLGLGGKI ISIAGLGFLG LGIQPPTPEW
GTIMNQGLPY LGKAPLITLS AGAMILVFVL SSNLIGSEIR DVMDPKTDSI IL
|
|---|
| |