Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_0210 |
Symbol | |
ID | 3923866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 235195 |
End bp | 236733 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637895858 |
Product | extracellular solute-binding protein |
Protein accession | YP_501701 |
Protein GI | 88601523 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | [TIGR02294] nickel ABC transporter, periplasmic nickel-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0873116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTGGG TAAAACTCTT CATTTTTTAT GGGTGTATTC TACTCTTGTT ATGTAACGTA CTAGTAATTG CAGATAACGG AGTAACGGTG CTTGATATCG CTGCTCCATG GGATGCAAAA ACCAGTGATC CACATGTCAA TGGAGCAATT GCCCAACGTA TGGGAACAAC CGAAACTCTT GTAGATATTA ATGATGAAGC AATGATTTCT CCAGGACTTG CAACATCATG GGAGGTTTCA GGCGATAAAA AAACATGGAC GTTTCATCTT CGTGAAGGAG TTAAGTTTCA TGATGGAACT CCCTTTACAG CACAGGCTAT GAAAAAATCC CTCGAAGATT CCCTTAAAAA ATCAAAAACA TTCTCTAGTG TTCCGATTCA GGAGATAAAA GCAGTAAATG ATAATACTCT AGAAATTGTT CTCACTCAAT CATTCCCATC TCTCCCTGCA TACATGGCAA AAGGAGAAAG TGCAGCATTA TCTGAATCAT CAATTGACCA GGGTGACATT TCAATCCCAT ACTCCACCGG GCCTTTTATC TTTAGTTCTT ATTCACCCAA CGAAAAATTT GTGGCAATAA AGAATCCGGA TTACTGGGGA AAAGTACCTT CAGTTGACGA AGTAGTTTAT CACGTTGTCC CTGAAGCTGA AACCAGGTCC CTGATGCTCC GAGGAGGAGA TGTGGACATA GCACAGATTC TTACACCTAC TATCACTGAA GGTTATTCAT CCGATAGTTC ATATACCATT AATACCGAGC CGATTTCACG TGTCAGACTC ATTTCGTACA ATTGCGAAGA GGGGCCCTTT GCTGATACAA CCGTTCGACA GGCAATGAAT TATGCAATCA ACCGTCAGGA TCTCATAGAT TATGTTCTTG AAGGAGTCGG AGAACCAGCA ACAAGTCTTT TCCCACCCAC TATGTTCTGG GGTAATAAAA AAATTCAGCC ATTTTCATAT AATCCCGAAA AAGCAAAAAC CATGCTTTCT GATGCAGGCT GGACAGATAG TAATAATGAT GGTATCCTGG ATAAGGATGG AGAAAAATTC TCAATTTCAC TTGTAACATA TACTGAACGT GCTGAACTCC CACCAATGGC TGAAATTATT CAGGATCAGT TGAAGAAAAT TGGTATTGAT GTTGAAGTCA AGGCTGTGGA TATTGATACA TCTGAAAATT TAAAAAACAG TGGCGATTTT GATATGTACC TCGGGGGACG TTCTTTGTTA AACGCTCCAG ATCCAGACTG GATCCTAATG GCAGATTATC ATTCATCAGG TTCATTCAAT AATGGATATG GCCCGTACCA TTGGAAAAAT GAGGAACTTG ACGATTTATT AACTCAGGCA AGAGAACTTA CCGATTCAGC GGCCAGAAAA GAAATTTATG ATAAAGTACA GCAGATCATC AATGATGAAG CTCCTGTTTC AGTCCTTAGT TATTATGTGA ATCAGGATGT AACCTCTAAA AATGTGAAAG GATATCGCAT GCATCCAACG GAATTTGCAT TCCATCTTGA AGATGTATCT CTATCCTAA
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Protein sequence | MKWVKLFIFY GCILLLLCNV LVIADNGVTV LDIAAPWDAK TSDPHVNGAI AQRMGTTETL VDINDEAMIS PGLATSWEVS GDKKTWTFHL REGVKFHDGT PFTAQAMKKS LEDSLKKSKT FSSVPIQEIK AVNDNTLEIV LTQSFPSLPA YMAKGESAAL SESSIDQGDI SIPYSTGPFI FSSYSPNEKF VAIKNPDYWG KVPSVDEVVY HVVPEAETRS LMLRGGDVDI AQILTPTITE GYSSDSSYTI NTEPISRVRL ISYNCEEGPF ADTTVRQAMN YAINRQDLID YVLEGVGEPA TSLFPPTMFW GNKKIQPFSY NPEKAKTMLS DAGWTDSNND GILDKDGEKF SISLVTYTER AELPPMAEII QDQLKKIGID VEVKAVDIDT SENLKNSGDF DMYLGGRSLL NAPDPDWILM ADYHSSGSFN NGYGPYHWKN EELDDLLTQA RELTDSAARK EIYDKVQQII NDEAPVSVLS YYVNQDVTSK NVKGYRMHPT EFAFHLEDVS LS
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