Gene Mhun_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_0184 
Symbol 
ID3922958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp205660 
End bp206865 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content45% 
IMG OID637895834 
Productmajor facilitator transporter 
Protein accessionYP_501677 
Protein GI88601499 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.133276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.55787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAACAG AATCTAAAAA GAAGATTTAT TCTAGTATCG GGGGGCATTT CCTGGTAGAT 
CTCTACTCAC CATTTCTGCC CATCATTCTT CCGGTCCTGA TTACTAATAT GAATCTCTCA
TTTTTTCTGG CAGGATTTAT GGTAACTGCC TATAATGTGA CATCATCATT AGTTCAGCCG
GTTGCAGGGC TGTTCAGCGA CAGGACTGGA AAAAAGGTAC CCATATGGAT ATGCGTACTG
CTATCAAGTG CCGGGATATC TCTCGCAGTC CTGACAAATA ACTATCTTCT TATGCTGGCC
CTGGTTTCAG GTGCAGCACT TGGGAATGCA CTGTTCCACC CGGCAGCGAT GGAATCAGTA
TATCGGCTCA GTCCAATAGA GAAGAGAGGT ATATTTAACT CGATCTTTAC AACAAGTGGA
AGTATCAGTT ACTCAATAGG CCCACTCATC GCTGGAGTAA TGATAACCTT CTTCGGGCTA
TCCAGCATCG CATGGCTGGT AATTCCTGGG ATATTGGGAG CAGTTTGGAT CTATTCTGTT
GATAAAAAAT TCAATACTTT AGTATCTGCT CATTATGAGA GGAAAAAGCC AGTATCAAAG
CAGAAAAAGG AGAGATACTG GTGGGTTCCT GCCGGTCTTG TGGTATTTCT CTGTTCTCTT
CGAGCCTGGA CTTATGTTGG AATAATTACC TACCTCCCGG CTCTCTTAAT GCTCGGACAG
CATGGTATGG ACACTATAAC CACATCACTT ATCGTCACAA TAATGCTTTT TATAGGTGTT
GCCGGCCAGA TTGCCGGAGG ATATCTTTCA GACAGATATG GGCGGAAAAA TATGCTGGTG
TTCGGCTTTG CAGCTGCAGT TCCCTTTTTT TGTCTTATCT TTCTAAGTCA GGGATGGCTT
ATGTATAGTG GTATCTTTAT GTACTCCTTC TTTGCGTGTT TCTGTTATGT CACCTCGGTC
ACTATGATGC AGGAACTTCT GCCCGAATCC GTAGGGTTTG CTTCAGGTCT TACCTTAGGT
CTTTGTGTGG GGGTTGGGGG TATCGGAGCC GCGATCATCG GCTGGGCTGC TGATAATATG
GGTTCCCTTC CGGATGCGAT GTTTCTCATG ATAATTCCAA CCGCATTATC GCCGATTCTT
GCGTTGTTCA TCAGATACCC GGATCAGAGA AGGATACGAG GCAGGGATGC TGACCTACCT
GAATGA
 
Protein sequence
MVTESKKKIY SSIGGHFLVD LYSPFLPIIL PVLITNMNLS FFLAGFMVTA YNVTSSLVQP 
VAGLFSDRTG KKVPIWICVL LSSAGISLAV LTNNYLLMLA LVSGAALGNA LFHPAAMESV
YRLSPIEKRG IFNSIFTTSG SISYSIGPLI AGVMITFFGL SSIAWLVIPG ILGAVWIYSV
DKKFNTLVSA HYERKKPVSK QKKERYWWVP AGLVVFLCSL RAWTYVGIIT YLPALLMLGQ
HGMDTITTSL IVTIMLFIGV AGQIAGGYLS DRYGRKNMLV FGFAAAVPFF CLIFLSQGWL
MYSGIFMYSF FACFCYVTSV TMMQELLPES VGFASGLTLG LCVGVGGIGA AIIGWAADNM
GSLPDAMFLM IIPTALSPIL ALFIRYPDQR RIRGRDADLP E