| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0115 |
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| Symbol | carB |
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| ID | 3923734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | + |
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| Start bp | 134816 |
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| End bp | 137986 |
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| Gene Length | 3171 bp |
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| Protein Length | 1056 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637895768 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_501612 |
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| Protein GI | 88601434 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACGGG ATCCATCCAT TAAAAAGGTC CTTCTCATCG GGTCAGGGCC GATTCAGATT
GGCCAGGCAG CAGAATTTGA CTTTTCAGGG TCACAAGCGT GTCGCGCTCT TCGCGAAGAA
GGAGTTTCGG TTGTACTGGT GAACTCAAAC CCTGCCACTA TTCAGACAGA TCCCGACATG
GCTGATGTTA CCTATGTCGA GCCATTACAG GCAGATATCA TTGCCAAGAT CATTAAAAAA
GAGAAGCCCG ATGGGATTCT TTCCGGAATG GGGGGTCAGA CCGGTCTGAA CTTGACGGCA
GAACTTGCTG AGATGGGTGC TCTTGAAGGG GTTAAGATCC TTGGAACACC TCTGAAAGCA
ATCTATGAAG GAGAAGACCG GGAGAAATTC CGTGACCTCA TGAACCGGAT CGGTGAACCA
GTCCCTCGTT CTGTCATTGT CAGTTCCCTG GATCAACTGG AGCATGCAGC ATCTGTTGTC
GGTTTTCCGG CAATCATCCG TCCGGCTTAT ACGCTTGGAG GAGCTGGTGG CGGAATTGCC
TACAATCTAG ATGAACTCCG CCGGATAGTT GAGCTGGGTC TTGGAAAATC CCGTATCCAT
CAGGTTCTCA TTGAAGAGAG TGTTGCCGGA TGGAAGGAGA TCGAGTTTGA GGTCATGCGT
GATGCGAATG ATACCTGTAT TACCATCTGT GGGATGGAAA ATGTTGATCC CATGGGTGTT
CATACCGGAG AGAGCGTGGT CGTTGCACCG ATACTCACCC TCCGCGATGA CGAATTCCAT
CTCCTGAGAA ATGCTGCTCT CAAGATCATC CGAGCGCTTG ATGTTCAGGG TGGCTGTAAC
ATCCAGTTTG CCTTTAAGGG AGATGATGAG TACCGTGTCA TCGAGGTTAA TCCACGGGTT
TCCCGTTCAT CTGCTCTTGC TTCAAAAGCG ACCGGGTATC CGATTGCACG GGTAGCATCA
AAAATTGCAA TCGGCCTCCG GCTTGATGAG ATCTTAAATA CTGTCACCGG AAAGACGCCT
GCCTCATTTG AGCCTTCGAT CGATTATGTC GTCGTTAAAG TCCCCCGGTG GCCTTTTGAC
AAGTTTAAGA CTGCTGACCG GACTCTTACA ACCGCAATGA AGTCGACAGG TGAAGTGATG
GCAATCGGCC GGTGTGTTGA AGAAGCCTTC CTCAAAGCAC TCCGCTCACT TGATACCGAT
GTTGAACATC ACACAGTCCT GTCGGAACTG AAAATGATCC TTTCACGGCC GACAGATGAG
CGGTTTGGTG CCCTGTTTGA CGCTCTTCGC CAGGGGATGA CCCTGAATGA GATCGCAGAG
ATAACCAGGA TAACTCCCTT CTGGCTTGAA AAAATTCAGA ATATTGTTGA GATGGAGAAA
GCCCTGACTG CACACCCTGA TGATGCAACC ATTCTCAAGG CAAAAGAATT TGGGTTTTCT
GACCTTGAAA TTGCTCAATA TTCCGGAAAG GATGTTTCTG AAGTCGAATC AAAAGTTGGT
CTTCCGGTAT ACAAAATGGT AGATACCTGT GCTGCTGAAT TTCCTGCACA GACACCGTAT
TTCTATTCAA CCTATGGGGA TAAGGTCTGT GAAGTAACCC ATTCTGACCG GAAAAAGGTC
ATGATTCTGG GTTCAGGGCC TATCCGAATT GGGCAGGGTA TTGAGTTTGA TTACTGCACA
GTACATGCGG TTACCGCTCT CAGGGAAGAT GGTTATGAGG TTCATGTTGT CAATAACAAT
CCTGAGACGG TGTCAACCGA TTTCGATACC TCTGACCGGC TGTTTTTTGA GCCAATGACG
CTGGAGGATG TCTCACATAT CCTTCAAAAA GATGATTATT ACGGGGTCAT GGTTCAGTTT
GGTGGTCAAA ACGCAGTTAA TCTGGCAGTC CCCTTAAAGA ATGAGATAGA TCGGTTAAAC
CTGAAAACCA GGATTCTTGG AACAACTCCT GATGCCATGG ATATGGCCGA GGATCGTGAC
CGGTTTAGTG TACTGCTTGA TTCACTCTCC ATTCCAACTC CTCCAAACGG ATCTGCGTAT
AGTGAGCAGG AGGCATATGC AACAGCGGAA CGAATCGGCT ATCCGGTTCT TGTCCGTCCG
TCCTATGTCC TTGGTGGCCG GGCGATGGAG ATCGTGCATG ATGATACGGA ACTTGCAACC
TATATGCGTG AAGCAGTTCG CGTCTCGAAA AGTCATCCGG TTCTTATCGA CCGTTTTTTA
CAGAATGCCA TTGAGCTTGA TGTTGATGCG GTCTGTGACG GGACTGATGT TATCATCGGG
GGAATCATGG AGCATATTGA GACCGCCGGG GTTCATTCCG GAGATTCAGC CTGTGTCATC
CCTCCGCAGT CCCTGTCTCC TGAAATTCTG GCTGATGTCC GTGATTATAC CAGAAAGATT
GCTCTTGGCC TTGGAGTTGT CGGTCTTGTA AATATTCAGT TTGCAGTGCA GGGAAGCACG
GTATATGTTC TTGAAGCAAA CCCTCGTGCC AGTCGGACCG TTCCTTTTGT GGCAAAGTCA
GTAGGAATAC CACTGGCAAA GATAGCTGCG CGTGTGATGA TGGGTGAACG ACTTGCTGAT
ATGCCATACA AGGAGATTGA GGTCTCCCAT GTTGCCGTGA AGGAAGTTCT GCTTCCCTTC
AACAAACTCC CCGGTGTTGA TACGGTCCTT GGGCCTGAGA TGAAATCCAC CGGAGAGGTC
ATGGGGATCG ATTATGACTT TGGCCGGGCA TATTACAAGG CCAGTATTGC CGCTCATAAC
CGGCTCCCGA AATCAGGAAA CGTCTTCATA TCTGTAACTG ATGACCTTAA GGATCAGATA
CTTCAGGTTG CAAAGACGTT TACTGAAAAT GGTCTCTCTA TTTATGCAAC ATCGGGGACT
GTTGAATTCT TTGCAGAAAG GGGTATTACG GCAAACCTTG TCAGAAAGAT TGCCGAAGGG
TCTCCGAATG TACTTGATAT GCTAAGAGCC GGAGAGATCA GCCTTATCAT CAATAATTTC
GCTGACAAGC AGTCACGCCA TGATCATCAG CAGATAATGC GGGTCGCTGT AGATTATGGG
ACACCCTATA TCACCACTTT GCAGGCGGCA GTCGCAGCTG CGGAAGCTAT CAATTCAGTC
AGGGAAGAGA ACCTGACAAT TGAACCACTA CAGCATTATA TCGGTCGCTG A
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| Protein sequence | MPRDPSIKKV LLIGSGPIQI GQAAEFDFSG SQACRALREE GVSVVLVNSN PATIQTDPDM
ADVTYVEPLQ ADIIAKIIKK EKPDGILSGM GGQTGLNLTA ELAEMGALEG VKILGTPLKA
IYEGEDREKF RDLMNRIGEP VPRSVIVSSL DQLEHAASVV GFPAIIRPAY TLGGAGGGIA
YNLDELRRIV ELGLGKSRIH QVLIEESVAG WKEIEFEVMR DANDTCITIC GMENVDPMGV
HTGESVVVAP ILTLRDDEFH LLRNAALKII RALDVQGGCN IQFAFKGDDE YRVIEVNPRV
SRSSALASKA TGYPIARVAS KIAIGLRLDE ILNTVTGKTP ASFEPSIDYV VVKVPRWPFD
KFKTADRTLT TAMKSTGEVM AIGRCVEEAF LKALRSLDTD VEHHTVLSEL KMILSRPTDE
RFGALFDALR QGMTLNEIAE ITRITPFWLE KIQNIVEMEK ALTAHPDDAT ILKAKEFGFS
DLEIAQYSGK DVSEVESKVG LPVYKMVDTC AAEFPAQTPY FYSTYGDKVC EVTHSDRKKV
MILGSGPIRI GQGIEFDYCT VHAVTALRED GYEVHVVNNN PETVSTDFDT SDRLFFEPMT
LEDVSHILQK DDYYGVMVQF GGQNAVNLAV PLKNEIDRLN LKTRILGTTP DAMDMAEDRD
RFSVLLDSLS IPTPPNGSAY SEQEAYATAE RIGYPVLVRP SYVLGGRAME IVHDDTELAT
YMREAVRVSK SHPVLIDRFL QNAIELDVDA VCDGTDVIIG GIMEHIETAG VHSGDSACVI
PPQSLSPEIL ADVRDYTRKI ALGLGVVGLV NIQFAVQGST VYVLEANPRA SRTVPFVAKS
VGIPLAKIAA RVMMGERLAD MPYKEIEVSH VAVKEVLLPF NKLPGVDTVL GPEMKSTGEV
MGIDYDFGRA YYKASIAAHN RLPKSGNVFI SVTDDLKDQI LQVAKTFTEN GLSIYATSGT
VEFFAERGIT ANLVRKIAEG SPNVLDMLRA GEISLIINNF ADKQSRHDHQ QIMRVAVDYG
TPYITTLQAA VAAAEAINSV REENLTIEPL QHYIGR
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