Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_0104 |
Symbol | |
ID | 3923799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 120839 |
End bp | 122701 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637895757 |
Product | type II secretion system protein E |
Protein accession | YP_501601 |
Protein GI | 88601423 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGGC TGCAGATTCA GGGGAAAATA CCTTTTCAGG AGGCTGAGAG TCATGATACT GAAGAGTGTA TACTAAACCC TGAGTCCTGC GCCCTGTACC GGATGCTGCC CGCAAATGCC AAAGAGTATG CCCGGAACTA TCCCCACCTT CTTGAATACC TCCATATCTT CCCGGTAGAT GAATTCGGAA TCCCGTTATT CTTTTCTGAG CTGAAACGTG ATTTGAAAGG GATTAAGGAT CCGAATCTCA TTTATCCTGC AAAACCTCCA ATTTTCATTC ATATCTTCTT TGATCCGAAT GATGTCAGGA ACTTTTACAT CCCCATCGAA CCATCGTTCA TGCATAATAT CGGCCGGTTG CTTCCGGCAA TCGAGTACCG GCTGGTAGAC CTGCTTGATG CCCTGGAAGA AGACCCGGTT ACTCCGGAAG AGCGGACAGC GGTATTAAAA CGCCTGCTCA GACAGGTCAT GTATATCAAG AAAGCAGGAG AAGCAATTGA TCCCAGCCTG CTGAAGATTG AAGGGCCGAA AGGATTTGGA GACAAGTTAA AATCATTCCT TACCACTGAT CTGACCGCCA AAGAAGAACC GGGTGCCGAG CGGCTTTTTG CAGATGTGCC CCATCTCTCT GACGGGCGTA TCATAGTGAG TCCCCAGGAG TTTGAAGCGA TTGAGTACCA GATGATCCGT GACAAAATCG ATGTCGGACT TCTGTATCCG TTTATCTCGG ATAATTTTAT TGAGGATATC ACCTGTGACG GGCTTGGCCC CATATTTATC GAACACAAGA TCTTCAAAGG GCTCAAATCT GTCGTCGGTT TTGATCAGGA GGCTGCACTT GATGATTTCT GTATTAAGCT TGCAGAAAAA TCGCGTCGCC CGATTACGTA CCGGAATCCA ATCGTTGATG CGACCCTTCC GGACGGATCA CGTATCAATA TCGTCTATTC AACGGAGATC AGCCGGCAGG GGAGTAACTT TACCATTCGT AAAGCGATGG ATGATGTCAT CTCCATCACC AAGCTGGTCG AATTTGGAAC CTGTAGTTAT GCACTTGCGG CATATCTCTG GATCTGCATT GAGAACGGAA TGTCCCTTTT CATGTCCGGC GAGACGGCAT CCGGCAAGAC AACCTCAATG AATGCTCTTA CAACCTTCAT CTCCCCTGAG TCAAAGATCG TCAGTATCGA GGACACTCCG GAACTTATCA TCCCTCATAA AAACTGGACC CGTGAAGTAT CCAAAGGAAA AGGAAAAGGT GAAGGTGAAG GTTCAGATGT TACCATGTTC GATCTCCTTC GTGCTGCACT TCGTCAGCGT CCAAACATGA TCATGGTCGG AGAGATCCGT GGAGTGGAAG GAGCAGTCGC ATTCGGTGCC ATGCAGACCG GCCACCCGGT GATGAGTACA TTCCACGCAG CAACGGTGGA GAAACTGATT CAGCGTCTTA CCGGTGACCC CATTCTTATC CCCAAGACCT TCATTGATAA CCTCAACCTG GTGGTCATTC AAAGTGCAGT CCGGCGGCCT GATGGAGCGA TGGTCAGACG TCAGCTGAAT GTTTCTGAAC TGGTCGGATA TGATGCACAA AGTGGAGGTT TCTCCTTTGT TGAGGTCTTT ACCTGGGACC CGGTCACTGA TACGCACGAA TTTACCGGTA AAGGTTCAAG CTATCTTCTG GAAAACAAGA TCGCAACCAT GCTTGGTATT CCTGAGCATA AAAAGGCGCA AATGTACATG GAAGTAGAAA AACGTGCTAA GATCCTGGAA CGGCTTCATA AAGCAGGATA TACTGACTTT ATCGAACTCT TTCTGATGAT AACAAAATTG AAAAAACAGG GACTTCTCAA TATCGATATC TGA
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Protein sequence | MSRLQIQGKI PFQEAESHDT EECILNPESC ALYRMLPANA KEYARNYPHL LEYLHIFPVD EFGIPLFFSE LKRDLKGIKD PNLIYPAKPP IFIHIFFDPN DVRNFYIPIE PSFMHNIGRL LPAIEYRLVD LLDALEEDPV TPEERTAVLK RLLRQVMYIK KAGEAIDPSL LKIEGPKGFG DKLKSFLTTD LTAKEEPGAE RLFADVPHLS DGRIIVSPQE FEAIEYQMIR DKIDVGLLYP FISDNFIEDI TCDGLGPIFI EHKIFKGLKS VVGFDQEAAL DDFCIKLAEK SRRPITYRNP IVDATLPDGS RINIVYSTEI SRQGSNFTIR KAMDDVISIT KLVEFGTCSY ALAAYLWICI ENGMSLFMSG ETASGKTTSM NALTTFISPE SKIVSIEDTP ELIIPHKNWT REVSKGKGKG EGEGSDVTMF DLLRAALRQR PNMIMVGEIR GVEGAVAFGA MQTGHPVMST FHAATVEKLI QRLTGDPILI PKTFIDNLNL VVIQSAVRRP DGAMVRRQLN VSELVGYDAQ SGGFSFVEVF TWDPVTDTHE FTGKGSSYLL ENKIATMLGI PEHKKAQMYM EVEKRAKILE RLHKAGYTDF IELFLMITKL KKQGLLNIDI
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