| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_5341 |
|---|
| Symbol | |
|---|
| ID | 4976746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009339 |
|---|
| Strand | - |
|---|
| Start bp | 70885 |
|---|
| End bp | 72630 |
|---|
| Gene Length | 1746 bp |
|---|
| Protein Length | 581 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640459569 |
|---|
| Product | cytochrome-c oxidase |
|---|
| Protein accession | YP_001136592 |
|---|
| Protein GI | 145225938 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
|---|
| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGCCG ATGCGCCATC GGTCGGGGAA CTTGAGGTAC GCCGTCCTTT TCCGGCCCGG
ATGGGCCCCA AAGGCAACCT GATCTACCGG TTGATCACGA CCACCGATCA CAAGTTGATC
GGCATCATGT ACTGCGTCGC CTGCTTCGCG TTCTTCCTCA TCGGCGGCCT GATGGCGCTG
TTCATCCGCA CCGAGCTGGC CGTGCCCGGC CTGCAGTTCC TGTCCAATGA GCAGTACAAC
CAGCTGTTCA CCATGCACGG CACGGTGATG TTGCTGTTCT ACGCCACCCC GATCGTGTTC
GGCTTCGCGA ACCTGGTGCT TCCGCTGCAG ATCGGCGCGC CCGACGTGGC GTTCCCGCGG
CTGAACGCGT TCTCGTTCTG GCTGTTCCTC TTCGGTGCAC TGATCGCCAC CGCGGGCTTC
ATCACCCCCG GCGGCGCCGC GGACTTCGGC TGGACCGCCT ACACACCCTT GTCTAGTGCG
ATCAATTCAC CAGGCGCCGG CGCCGACCTC TGGATTCTCG GCCTGATCGT CGGCGGGCTG
GGCACGATTT TAGGCGCGGT CAACATGATC ACCACCGTGG TGTGTATGCG TGCGCCGGGC
ATGACGATGT TCCGGATGCC GATCTTCACC TGGAACATCC TGGTGACGTC GATCCTGGTG
CTGCTGGCGT TTCCGCTGCT GACCGCGGCA TTGTTCGCGT TGGCCGCCGA CCGTCACCTC
GGTGCCCACG TGTACGACCC GGCGAACGGA GGTGTGTTGC TGTGGCAGCA CTTGTTCTGG
TTCTTCGGCC ACCCCGAGGT GTACATCATC GCGCTGCCGT TCTTCGGCAT CGTGTCCGAG
ATCTTCCCGG TGTTCTCCCG CAAGCCGATC TTCGGCTACA CCACGCTGAT CTACGCGACG
CTGGGCATCG CGGCGCTGTC GGTCGCGGTG TGGGCGCACC ACATGTACGC CACCGGCGCG
GTGCTGTTGC CGTTCTTCTC GTTCATGACG TTCCTGATCG CGGTCCCGAC GGGCATCAAG
TTCTTCAACT GGATAGGCAC GATGTGGAAG GGCCAGTTGA CGTTCGAGAC GCCGATGCTG
TTCTCCGTCG GCTTCATAGT GACGTTCCTG CTCGGTGGTC TGTCCGGGGT GCTGCTGGCC
AGCCCGCCGA TCGACTTCCA GGTCACCGAC AGCTACTTCG TCATCGCGCA CTTCCACTAC
GTGCTGTTCG GCACCATCGT GTTCGCCACC TATGCGGGGA TCTACTTCTG GTTCCCGAAG
ATGACGGGCC GGTTGCTCGA CGAGCGGCTG GGCAAGCTGC ACTTCTGGCT GACCTTCATC
GGCTTCCACA CCACGTTCCT GGTGCAGCAC TGGCTCGGCA ACGAGGGCAT GCCGCGCCGC
TACGCCGACT ACCTGCCCAG CGACGGCTTC ACCACGCTGA ACATCGTGTC CACCATCGGT
GCATTCATCC TGGGCGCCTC GACGCTGCCG TTCCTGTGGA ACATCTTCAA GAGCTGGCGC
TACGGCGAGG TCGTCACCGT CGACGATCCG TGGGGGTACG GAAACTCCCT GGAGTGGGCC
ACCAGTTGCC CGCCGCCGCG GCACAACTTC ACCGAGCTGC CCAGGATCCG TTCCGAGCGC
CCCGCCTTCG AGCTGCACTA CCCGCACATG GTCGAACGGA TGCGCCGCGA AGCCCACGTC
GGCCGTGCCC ACGGACCTGA TGACGGAGAC GTCACGCGCC TCGACGACGC TCAAGTGCGC
ACCTAA
|
|---|
| Protein sequence | MVADAPSVGE LEVRRPFPAR MGPKGNLIYR LITTTDHKLI GIMYCVACFA FFLIGGLMAL
FIRTELAVPG LQFLSNEQYN QLFTMHGTVM LLFYATPIVF GFANLVLPLQ IGAPDVAFPR
LNAFSFWLFL FGALIATAGF ITPGGAADFG WTAYTPLSSA INSPGAGADL WILGLIVGGL
GTILGAVNMI TTVVCMRAPG MTMFRMPIFT WNILVTSILV LLAFPLLTAA LFALAADRHL
GAHVYDPANG GVLLWQHLFW FFGHPEVYII ALPFFGIVSE IFPVFSRKPI FGYTTLIYAT
LGIAALSVAV WAHHMYATGA VLLPFFSFMT FLIAVPTGIK FFNWIGTMWK GQLTFETPML
FSVGFIVTFL LGGLSGVLLA SPPIDFQVTD SYFVIAHFHY VLFGTIVFAT YAGIYFWFPK
MTGRLLDERL GKLHFWLTFI GFHTTFLVQH WLGNEGMPRR YADYLPSDGF TTLNIVSTIG
AFILGASTLP FLWNIFKSWR YGEVVTVDDP WGYGNSLEWA TSCPPPRHNF TELPRIRSER
PAFELHYPHM VERMRREAHV GRAHGPDDGD VTRLDDAQVR T
|
|---|
| |