Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_5093 |
Symbol | |
ID | 4976404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | - |
Start bp | 5409976 |
End bp | 5410728 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640459320 |
Product | endonuclease IV |
Protein accession | YP_001136347 |
Protein GI | 145225669 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0648] Endonuclease IV |
TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.254368 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.214987 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTGATCG GTTCCCATGT TCACGGCGAT GACCCCCTGG CCGCGGCAGA GGCGGACGGC GCTGACGTCG TCCAGTTCTT CCTCGGCAAT CCGCAGAGTT GGAAGAAGCC GCCGCCGCGG GACGACGCCG ACGTGCTGAA AGCGGCTTCC ATGCCGATCT ACGTGCATGC TCCGTATCTG ATCAACGTCG CCTCGGCGAA CAACCGGGTT CGGATCCCGT CGCGAAAGAT CCTGCAGGAC ACCTGTGATG CTGCCTCGGA AATCGGCGCC ACCGCGGTGA TCGTGCACGG CGGACACGCC GACGACAACG ACATGGACGC CGGCTTCGAG CGCTGGGTGA AGGCTCTGGC CAGCCTCAAG ACCGACGTCC CCGTCTACCT GGAGAACACC GCGGGCGGCG ACCACGCGAT GGCCCGCCAC TTCGACACGA TCGCGCGCCT GTGGGACCAC ATCGGCGACA TGGGCATCGG ATTCTGCCTC GACACCTGCC ACGCCTGGGC CGCGGGAGAG GCGCTCGTCG ACGCGGTCGA ACGGATCAAG GGCATCACGG GCCGCATCGA CCTCGTCCAC TGCAACGACT CACGCGACGC CGCCGGATCG GGCGCGGACC GGCACGCCAA CTTCGGCACC GGTCAGATCG ATCCGCAACT GCTCGTCGCG GTGGTCACCG CCGCGGGTGC GCCGGTGATC TGCGAGACGT CGGACGAAGG CCGCAAGGAC GACATCGCGT TCCTGCGGGA GCACGTCAAC TAG
|
Protein sequence | MLIGSHVHGD DPLAAAEADG ADVVQFFLGN PQSWKKPPPR DDADVLKAAS MPIYVHAPYL INVASANNRV RIPSRKILQD TCDAASEIGA TAVIVHGGHA DDNDMDAGFE RWVKALASLK TDVPVYLENT AGGDHAMARH FDTIARLWDH IGDMGIGFCL DTCHAWAAGE ALVDAVERIK GITGRIDLVH CNDSRDAAGS GADRHANFGT GQIDPQLLVA VVTAAGAPVI CETSDEGRKD DIAFLREHVN
|
| |