| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_5031 |
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| Symbol | rplR |
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| ID | 4976342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium gilvum PYR-GCK |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009338 |
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| Strand | - |
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| Start bp | 5353744 |
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| End bp | 5354154 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640459258 |
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| Product | 50S ribosomal protein L18 |
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| Protein accession | YP_001136285 |
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| Protein GI | 145225607 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0256] Ribosomal protein L18 |
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| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000697313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.548641 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTACCA AGACGAACAC CAAAGAGACC GGGCACTCCC CGGTCGGCAA GAACATCAGC
GAGACGCGCC GCACCTCGCG GCTGCGCAGG CACGCACGCC TGCGCAAGAA GGTCTCCGGC
ACCGCCGAGC GTCCGCGCCT GGTGGTCAAC CGGTCCTCGC GGCACATCCA TGTGCAGCTC
GTCGACGACC TGGCCGGCGT CACGCTGGCC GCGGCGTCCT CGATCGAGGG CGACGTGCGG
GCGACCGACG GCGACAAGAA GGCCGCCAGC GCCCGTGTCG GTCAGCTGAT CGCCGAGCGC
GCCAAGGCCG CCGGCATCGA GGAGGTCGTG TTCGACCGCG GTGGGTACAC CTACGGCGGA
CGGATCGCGG CACTGGCCGA CGCCGCGCGT GAGAGCGGGC TGAAATTCTG A
|
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| Protein sequence | MATKTNTKET GHSPVGKNIS ETRRTSRLRR HARLRKKVSG TAERPRLVVN RSSRHIHVQL
VDDLAGVTLA AASSIEGDVR ATDGDKKAAS ARVGQLIAER AKAAGIEEVV FDRGGYTYGG
RIAALADAAR ESGLKF
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